RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C RPL43BP0CX26 92 aa1.03□□□□□ -2.24
CCL1YPR025C UBC4P15731 148 aa1.03□□□□□ -2.24
CCL1YPR025C YMR090WQ04304 227 aaKnown RBP1.03□□□□□ -2.24
CCL1YPR025C YMR321CQ04898 105 aa1.03□□□□□ -2.24
CCL1YPR025C YOR034C-AQ3E735 80 aa1.03□□□□□ -2.24
CCL1YPR025C YOS1Q3E834 85 aa1.03□□□□□ -2.24
CCL1YPR025C GEA1P47102 1408 aaPredicted RBP1.03□□□□□ -2.24
CCL1YPR025C TY4B-HP0C2J7 1802 aa1.03□□□□□ -2.25
CCL1YPR025C YRF1-1P0CX20 1796 aa1.02□□□□□ -2.25
CCL1YPR025C YRF1-5P0CX21 1796 aa1.02□□□□□ -2.25
CCL1YPR025C YRF1-8P0CX22 1796 aa1.02□□□□□ -2.25
CCL1YPR025C LSM6Q06406 86 aaKnown RBP1.02□□□□□ -2.25
CCL1YPR025C REV3P14284 1504 aa1.01□□□□□ -2.25
CCL1YPR025C TOP2P06786 1428 aaKnown RBP1.01□□□□□ -2.25
CCL1YPR025C YHR138CP38841 114 aaPredicted RBP1.01□□□□□ -2.25
CCL1YPR025C YJR128WP47162 119 aa1.01□□□□□ -2.25
CCL1YPR025C NTE1Q04958 1679 aa1□□□□□ -2.25
CCL1YPR025C YCL048W-AQ2V2Q2 79 aa1□□□□□ -2.25
CCL1YPR025C BRR2P32639 2163 aaKnown RBP1□□□□□ -2.25
CCL1YPR025C GEA2P39993 1459 aaKnown RBP0.99□□□□□ -2.25
CCL1YPR025C YLR255CO13574 117 aa0.98□□□□□ -2.25
CCL1YPR025C RSM19P53733 91 aaPredicted RBP0.98□□□□□ -2.25
CCL1YPR025C YDR210WQ03482 75 aa0.98□□□□□ -2.25
CCL1YPR025C YOL118CQ08259 102 aa0.98□□□□□ -2.25
CCL1YPR025C KSH1Q8TGJ3 72 aa0.98□□□□□ -2.25
CCL1YPR025C POL2P21951 2222 aaKnown RBP0.97□□□□□ -2.25
CCL1YPR025C CCW14O13547 238 aa0.97□□□□□ -2.25
CCL1YPR025C IMP2P46972 177 aa0.97□□□□□ -2.25
CCL1YPR025C MIX14Q04341 121 aa0.97□□□□□ -2.25
CCL1YPR025C SRB6P32570 121 aa0.96□□□□□ -2.26
CCL1YPR025C YPL225WQ08971 146 aaKnown RBP0.96□□□□□ -2.26
CCL1YPR025C YLR307C-AQ3E825 87 aa0.96□□□□□ -2.26
CCL1YPR025C CAT8P39113 1433 aa0.96□□□□□ -2.26
CCL1YPR025C YLR157W-EP0CF00 54 aa0.95□□□□□ -2.26
CCL1YPR025C PAU5P43575 122 aa0.95□□□□□ -2.26
CCL1YPR025C ZEO1Q08245 113 aa0.95□□□□□ -2.26
CCL1YPR025C PDR10P51533 1564 aa0.95□□□□□ -2.26
CCL1YPR025C YCR095W-AQ3E787 52 aa0.94□□□□□ -2.26
CCL1YPR025C SNF2P22082 1703 aa0.93□□□□□ -2.26
CCL1YPR025C ROX3P25046 220 aa0.93□□□□□ -2.26
CCL1YPR025C AUA1P32450 94 aa0.93□□□□□ -2.26
CCL1YPR025C BLM10P43583 2143 aa0.93□□□□□ -2.26
CCL1YPR025C YOR289WQ12012 251 aaPredicted RBP0.93□□□□□ -2.26
CCL1YPR025C YPL038W-AQ3E7B4 63 aa0.93□□□□□ -2.26
CCL1YPR025C RRT15Q3E811 62 aa0.93□□□□□ -2.26
CCL1YPR025C YIL086CP40503 102 aa0.92□□□□□ -2.26
CCL1YPR025C RIM15P43565 1770 aa0.92□□□□□ -2.26
CCL1YPR025C TY1B-BRQ12193 1756 aa0.92□□□□□ -2.26
CCL1YPR025C RSF2P46974 1380 aa0.92□□□□□ -2.26
CCL1YPR025C TY1B-BLQ12490 1755 aa0.91□□□□□ -2.26
CCL1YPR025C GCV3P39726 170 aaPredicted RBP0.91□□□□□ -2.26
CCL1YPR025C YRF1-2P40105 1681 aa0.91□□□□□ -2.26
CCL1YPR025C SRB8P25648 1427 aa0.9□□□□□ -2.26
CCL1YPR025C PAU6P0CE90 120 aa0.9□□□□□ -2.27
CCL1YPR025C PAU18P0CE91 120 aa0.9□□□□□ -2.27
CCL1YPR025C SHU1P38751 150 aa0.9□□□□□ -2.27
CCL1YPR025C EMC5P40540 141 aa0.9□□□□□ -2.27
CCL1YPR025C ESC1Q03661 1658 aaKnown RBP0.9□□□□□ -2.27
CCL1YPR025C FAS2P19097 1887 aaKnown RBP0.9□□□□□ -2.27
CCL1YPR025C HMRA1P0CY11 126 aa0.89□□□□□ -2.27
CCL1YPR025C YBL071CP38185 102 aa0.89□□□□□ -2.27
CCL1YPR025C YHL005CP38752 130 aa0.89□□□□□ -2.27
CCL1YPR025C MRX7P53869 86 aa0.89□□□□□ -2.27
CCL1YPR025C SNA2P56508 79 aa0.89□□□□□ -2.27
CCL1YPR025C SSN2P38931 1420 aa0.88□□□□□ -2.27
CCL1YPR025C PRP8P33334 2413 aaKnown RBP0.87□□□□□ -2.27
CCL1YPR025C MSL1P40567 111 aaPredicted RBP0.87□□□□□ -2.27
CCL1YPR025C COX12Q01519 83 aa0.87□□□□□ -2.27
CCL1YPR025C SWR1Q05471 1514 aa0.87□□□□□ -2.27
CCL1YPR025C MPC2P38857 129 aa0.86□□□□□ -2.27
CCL1YPR025C YHR173CP38864 112 aa0.86□□□□□ -2.27
CCL1YPR025C NHP10Q03435 203 aa0.86□□□□□ -2.27
CCL1YPR025C YNR034W-AQ3E841 98 aa0.86□□□□□ -2.27
CCL1YPR025C ECM29P38737 1868 aa0.86□□□□□ -2.27
CCL1YPR025C MRP17P28778 131 aa0.85□□□□□ -2.27
CCL1YPR025C MRPL38P35996 138 aaPredicted RBP0.85□□□□□ -2.27
CCL1YPR025C SPC1P46965 94 aa0.85□□□□□ -2.27
CCL1YPR025C YDR029WQ12111 104 aa0.85□□□□□ -2.27
CCL1YPR025C COX19Q3E731 98 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-DR6P0C2I3 1755 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-LR2P0C2I5 1755 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-PR2P0C2J0 1756 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-PR3P0C2J1 1755 aaKnown RBP0.85□□□□□ -2.27
CCL1YPR025C TY1B-JR2P47100 1755 aaKnown RBP0.85□□□□□ -2.27
CCL1YPR025C TY1B-MR1Q04214 1755 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-MR2Q04670 1755 aaKnown RBP0.85□□□□□ -2.27
CCL1YPR025C TY1B-NL1Q12112 1755 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-GR1Q12141 1755 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-GR3Q12316 1755 aa0.85□□□□□ -2.27
CCL1YPR025C TY1B-PLQ12414 1755 aaKnown RBP0.85□□□□□ -2.27
CCL1YPR025C TY1B-ORQ92393 1755 aa0.85□□□□□ -2.27
CCL1YPR025C DNF3Q12674 1656 aa0.84□□□□□ -2.27
CCL1YPR025C ICY1Q04329 127 aa0.84□□□□□ -2.27
CCL1YPR025C YDR010CQ12426 110 aa0.84□□□□□ -2.27
CCL1YPR025C POL1P13382 1468 aa0.84□□□□□ -2.28
CCL1YPR025C GDB1Q06625 1536 aa0.84□□□□□ -2.28
CCL1YPR025C YBR072C-AQ3E794 53 aa0.83□□□□□ -2.28
CCL1YPR025C YCR075W-AQ3E830 75 aa0.83□□□□□ -2.28
CCL1YPR025C TY1B-LR3P0C2I6 1755 aaKnown RBP0.83□□□□□ -2.28
CCL1YPR025C PAU20Q08322 120 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms