RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	RAD6	P06104	172 aa		3.98	□□□□□ -1.77
NUP1	YOR098C	DDR48	P18899	430 aa	Known RBP	3.98	□□□□□ -1.77
NUP1	YOR098C	GEP7	P53171	287 aa		3.98	□□□□□ -1.77
NUP1	YOR098C	NCE101	Q02820	53 aa		3.98	□□□□□ -1.77
NUP1	YOR098C	BRR2	P32639	2163 aa	Known RBP	3.98	□□□□□ -1.77
NUP1	YOR098C	ACC1	Q00955	2233 aa	Known RBP	3.98	□□□□□ -1.77
NUP1	YOR098C	FLO9	P39712	1322 aa		3.98	□□□□□ -1.77
NUP1	YOR098C	IRA1	P18963	3092 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	RPB7	P34087	171 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	MOB1	P40484	314 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	ELC1	Q03071	99 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	MRPS8	Q03799	155 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	YPR108W-A	Q3E7B3	70 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	YLR365W	Q7LIF2	110 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	QCR9	P22289	66 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	SNU13	P39990	126 aa	Known RBP	3.97	□□□□□ -1.77
NUP1	YOR098C	GAT4	P40569	121 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	YOR192C-C	Q3E736	78 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	YLR363W-A	Q3E747	85 aa		3.97	□□□□□ -1.77
NUP1	YOR098C	FMP27	Q06179	2628 aa		3.96	□□□□□ -1.78
NUP1	YOR098C	RPS22A	P0C0W1	130 aa	Known RBP	3.96	□□□□□ -1.78
NUP1	YOR098C	POC4	Q12245	148 aa	Predicted RBP	3.96	□□□□□ -1.78
NUP1	YOR098C	YOR268C	Q08734	132 aa		3.96	□□□□□ -1.78
NUP1	YOR098C	YDR034W-B	Q6Q5X2	51 aa		3.96	□□□□□ -1.78
NUP1	YOR098C	POL2	P21951	2222 aa	Known RBP	3.96	□□□□□ -1.78
NUP1	YOR098C	RRT1	P38192	103 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	YER135C	P40082	130 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	HUA1	P40325	198 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	ATG40	Q99325	256 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	FAB1	P34756	2278 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	YMR230W-A	Q3E7B5	62 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	YCR075W-A	Q3E830	75 aa		3.95	□□□□□ -1.78
NUP1	YOR098C	YFR045W	P43617	309 aa		3.94	□□□□□ -1.78
NUP1	YOR098C	FIT3	Q08907	204 aa		3.94	□□□□□ -1.78
NUP1	YOR098C	HYP2	P23301	157 aa	Known RBP	3.94	□□□□□ -1.78
NUP1	YOR098C	MID2	P36027	376 aa		3.94	□□□□□ -1.78
NUP1	YOR098C	YNR064C	P53750	290 aa		3.94	□□□□□ -1.78
NUP1	YOR098C	RPS22B	Q3E7Y3	130 aa	Known RBP	3.94	□□□□□ -1.78
NUP1	YOR098C	KTI11	Q3E840	82 aa		3.94	□□□□□ -1.78
NUP1	YOR098C	RIM9	Q04734	239 aa		3.93	□□□□□ -1.78
NUP1	YOR098C	HSP150	P32478	413 aa		3.93	□□□□□ -1.78
NUP1	YOR098C	SFT2	P38166	215 aa		3.93	□□□□□ -1.78
NUP1	YOR098C	POP3	P53833	195 aa	Predicted RBP	3.93	□□□□□ -1.78
NUP1	YOR098C	YMR295C	Q03559	197 aa		3.93	□□□□□ -1.78
NUP1	YOR098C	CYR1	P08678	2026 aa	Known RBP	3.93	□□□□□ -1.78
NUP1	YOR098C	BRP1	P53194	125 aa		3.92	□□□□□ -1.78
NUP1	YOR098C	IRC19	Q07843	230 aa		3.92	□□□□□ -1.78
NUP1	YOR098C	YIL102C-A	Q2V2P5	75 aa		3.92	□□□□□ -1.78
NUP1	YOR098C	CYB5	P40312	120 aa		3.92	□□□□□ -1.78
NUP1	YOR098C	YHR138C	P38841	114 aa	Predicted RBP	3.91	□□□□□ -1.78
NUP1	YOR098C	HAL1	Q01766	294 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	PRM3	Q08931	133 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	INO4	P13902	151 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	YCR050C	P25630	102 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	LIP1	Q03579	150 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	FZF1	P32805	299 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	SRX1	P36077	127 aa		3.91	□□□□□ -1.78
NUP1	YOR098C	YHP1	Q04116	353 aa		3.9	□□□□□ -1.78
NUP1	YOR098C	YSF3	P0C074	85 aa	Predicted RBP	3.9	□□□□□ -1.79
NUP1	YOR098C	RPS27A	P35997	82 aa	Known RBP	3.9	□□□□□ -1.79
NUP1	YOR098C	RPS27B	P38711	82 aa		3.9	□□□□□ -1.79
NUP1	YOR098C	YAR029W	P39549	74 aa		3.9	□□□□□ -1.79
NUP1	YOR098C	HMRA1	P0CY11	126 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YKR032W	P36127	104 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	MIC27	P50945	234 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	SNF11	P38956	169 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YNL217W	P40152	326 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YOR376W-A	Q3E805	51 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	MDM35	O60200	86 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YFL065C	P43539	102 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YPR203W	Q08994	102 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YKL023C-A	Q2V2P3	75 aa		3.89	□□□□□ -1.79
NUP1	YOR098C	YNR077C	P53758	84 aa		3.88	□□□□□ -1.79
NUP1	YOR098C	YML079W	Q03629	201 aa		3.88	□□□□□ -1.79
NUP1	YOR098C	YOR381W-A	Q3E804	55 aa		3.88	□□□□□ -1.79
NUP1	YOR098C	YPI1	P43587	155 aa		3.88	□□□□□ -1.79
NUP1	YOR098C	YLR296W	Q05898	108 aa		3.88	□□□□□ -1.79
NUP1	YOR098C	FAS1	P07149	2051 aa	Known RBP	3.88	□□□□□ -1.79
NUP1	YOR098C	PIR5	P46999	287 aa		3.87	□□□□□ -1.79
NUP1	YOR098C	TOM7	P53507	60 aa		3.87	□□□□□ -1.79
NUP1	YOR098C	UPS1	Q05776	175 aa		3.87	□□□□□ -1.79
NUP1	YOR098C	YOR097C	Q12274	175 aa	Predicted RBP	3.87	□□□□□ -1.79
NUP1	YOR098C	IRC23	Q08416	157 aa		3.87	□□□□□ -1.79
NUP1	YOR098C	YAL064W	P39711	94 aa		3.87	□□□□□ -1.79
NUP1	YOR098C	CCS1	P40202	249 aa	Known RBP	3.86	□□□□□ -1.79
NUP1	YOR098C	ATX1	P38636	73 aa		3.86	□□□□□ -1.79
NUP1	YOR098C	SPG1	P50088	95 aa		3.86	□□□□□ -1.79
NUP1	YOR098C	YGL260W	P53056	76 aa		3.86	□□□□□ -1.79
NUP1	YOR098C	SEN1	Q00416	2231 aa	Known RBP	3.86	□□□□□ -1.79
NUP1	YOR098C	TOR1	P35169	2470 aa		3.86	□□□□□ -1.79
NUP1	YOR098C	YHR130C	P38834	111 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	LST8	P41318	303 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	MIX17	Q03667	156 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	UBC5	P15732	148 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	ATP19	P81451	68 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	YHR173C	P38864	112 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	YIL014C-A	Q02598	104 aa		3.85	□□□□□ -1.79
NUP1	YOR098C	MRPL31	P14063	131 aa	Predicted RBP	3.84	□□□□□ -1.79
NUP1	YOR098C	YJL027C	P47063	138 aa	Predicted RBP	3.84	□□□□□ -1.79
NUP1	YOR098C	FPR1	P20081	114 aa	Known RBP	3.84	□□□□□ -1.79

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