RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W MRPL11P36521 249 aaPredicted RBP1.98□□□□□ -2.09
SIN3YOL004W MRPS16Q02608 121 aa1.97□□□□□ -2.09
SIN3YOL004W RNH202Q05635 350 aa1.97□□□□□ -2.09
SIN3YOL004W KEI1Q06346 221 aa1.97□□□□□ -2.09
SIN3YOL004W YER078W-AQ3E7A2 54 aa1.97□□□□□ -2.09
SIN3YOL004W YHR139C-AO13536 103 aa1.97□□□□□ -2.09
SIN3YOL004W VAR1P02381 398 aa1.97□□□□□ -2.09
SIN3YOL004W ATP15P21306 62 aa1.97□□□□□ -2.09
SIN3YOL004W RPL14AP36105 138 aaKnown RBP1.97□□□□□ -2.09
SIN3YOL004W RPL14BP38754 138 aaKnown RBP1.97□□□□□ -2.09
SIN3YOL004W HSP26P15992 214 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SIN3YOL004W UBR1P19812 1950 aa1.97□□□□□ -2.09
SIN3YOL004W NSE4P43124 402 aa1.97□□□□□ -2.09
SIN3YOL004W GON7P46984 123 aa1.97□□□□□ -2.09
SIN3YOL004W YKL018C-AQ3E7A7 99 aa1.97□□□□□ -2.09
SIN3YOL004W FMT1P32785 401 aa1.97□□□□□ -2.09
SIN3YOL004W MRPL44P19956 98 aa1.96□□□□□ -2.1
SIN3YOL004W YLR042CQ07990 161 aa1.96□□□□□ -2.1
SIN3YOL004W YOR192C-CQ3E736 78 aa1.96□□□□□ -2.1
SIN3YOL004W UBC5P15732 148 aa1.96□□□□□ -2.1
SIN3YOL004W SCM4P32564 187 aa1.96□□□□□ -2.1
SIN3YOL004W YML079WQ03629 201 aa1.96□□□□□ -2.1
SIN3YOL004W ATG41Q12048 136 aa1.96□□□□□ -2.1
SIN3YOL004W POR1P04840 283 aaKnown RBP1.96□□□□□ -2.1
SIN3YOL004W HAP3P13434 144 aa1.96□□□□□ -2.1
SIN3YOL004W FYV12Q08559 129 aa1.96□□□□□ -2.1
SIN3YOL004W YOR011W-AQ3E807 68 aa1.96□□□□□ -2.1
SIN3YOL004W MRPS9P38120 278 aa1.95□□□□□ -2.1
SIN3YOL004W DIE2P50076 525 aa1.95□□□□□ -2.1
SIN3YOL004W KNH1P50112 268 aa1.95□□□□□ -2.1
SIN3YOL004W YMR090WQ04304 227 aaKnown RBP1.95□□□□□ -2.1
SIN3YOL004W YOL131WQ08270 108 aa1.95□□□□□ -2.1
SIN3YOL004W YBR298C-AQ8TGK4 73 aa1.95□□□□□ -2.1
SIN3YOL004W YPR096CO13587 100 aa1.95□□□□□ -2.1
SIN3YOL004W HIS3P06633 220 aa1.95□□□□□ -2.1
SIN3YOL004W SLH1P53327 1967 aaKnown RBP1.95□□□□□ -2.1
SIN3YOL004W NOP1P15646 327 aaKnown RBP1.95□□□□□ -2.1
SIN3YOL004W VTC1P40046 129 aaRIP-Chip data1.95□□□□□ -2.1not detected
SIN3YOL004W CCS1P40202 249 aaKnown RBP1.95□□□□□ -2.1
SIN3YOL004W RPL33BP41056 107 aaKnown RBP1.95□□□□□ -2.1
SIN3YOL004W THG1P53215 237 aaKnown RBP1.95□□□□□ -2.1
SIN3YOL004W GPI11Q06636 219 aa1.95□□□□□ -2.1
SIN3YOL004W PRE1P22141 198 aaKnown RBP1.94□□□□□ -2.1
SIN3YOL004W YNL146C-AQ3E7Z1 64 aa1.94□□□□□ -2.1
SIN3YOL004W YHR032W-AP0C5N6 59 aa1.94□□□□□ -2.1
SIN3YOL004W FCF1Q05498 189 aaPredicted RBP1.94□□□□□ -2.1
SIN3YOL004W ECM19Q06011 112 aa1.94□□□□□ -2.1
SIN3YOL004W PAM17P36147 197 aa1.94□□□□□ -2.1
SIN3YOL004W YBR209WP38311 105 aa1.94□□□□□ -2.1
SIN3YOL004W PAM16P42949 149 aa1.94□□□□□ -2.1
SIN3YOL004W SMD1Q02260 146 aaPredicted RBP1.94□□□□□ -2.1
SIN3YOL004W SCS22Q6Q595 175 aa1.94□□□□□ -2.1
SIN3YOL004W YOR015WQ12169 119 aa1.94□□□□□ -2.1
SIN3YOL004W CUE4Q04201 117 aaPredicted RBP1.93□□□□□ -2.1
SIN3YOL004W COX10P21592 462 aa1.93□□□□□ -2.1
SIN3YOL004W UPS3Q04006 179 aa1.93□□□□□ -2.1
SIN3YOL004W YPR013CQ12145 317 aa1.93□□□□□ -2.1
SIN3YOL004W MPM1P40364 252 aa1.93□□□□□ -2.1
SIN3YOL004W YFR045WP43617 309 aa1.93□□□□□ -2.1
SIN3YOL004W ANT1Q06497 328 aa1.93□□□□□ -2.1
SIN3YOL004W GPI19Q04082 140 aa1.92□□□□□ -2.1
SIN3YOL004W YDL157CQ12082 118 aa1.92□□□□□ -2.1
SIN3YOL004W FZF1P32805 299 aa1.92□□□□□ -2.1
SIN3YOL004W YNL217WP40152 326 aa1.92□□□□□ -2.1
SIN3YOL004W YML054C-AQ3E809 52 aa1.92□□□□□ -2.1
SIN3YOL004W FYV4P38783 130 aaPredicted RBP1.92□□□□□ -2.1
SIN3YOL004W MRPL27P36526 146 aaPredicted RBP1.91□□□□□ -2.1
SIN3YOL004W NRG2P38082 220 aa1.91□□□□□ -2.1
SIN3YOL004W YBL071CP38185 102 aa1.91□□□□□ -2.1
SIN3YOL004W ATP20Q12233 115 aa1.91□□□□□ -2.1
SIN3YOL004W Q0032Q9ZZX7 96 aa1.91□□□□□ -2.1
SIN3YOL004W MDN1Q12019 4910 aaKnown RBP1.91□□□□□ -2.1
SIN3YOL004W VMA21P41806 77 aa1.91□□□□□ -2.1
SIN3YOL004W YKR070WP36151 352 aaKnown RBP1.91□□□□□ -2.1
SIN3YOL004W YPR195CQ06594 109 aa1.91□□□□□ -2.1
SIN3YOL004W YAR029WP39549 74 aa1.9□□□□□ -2.1
SIN3YOL004W TVP18Q04767 167 aa1.9□□□□□ -2.1
SIN3YOL004W ENV10Q99382 181 aa1.9□□□□□ -2.1
SIN3YOL004W YIL059CP40520 121 aa1.9□□□□□ -2.1
SIN3YOL004W RSM19P53733 91 aaPredicted RBP1.9□□□□□ -2.1
SIN3YOL004W YHR022CP38763 256 aa1.9□□□□□ -2.11
SIN3YOL004W YCR050CP25630 102 aa1.9□□□□□ -2.11
SIN3YOL004W YMR103CQ04436 120 aa1.9□□□□□ -2.11
SIN3YOL004W COA6Q3E846 104 aa1.9□□□□□ -2.11
SIN3YOL004W PEX4P29340 183 aa1.89□□□□□ -2.11
SIN3YOL004W SHU1P38751 150 aa1.89□□□□□ -2.11
SIN3YOL004W GTT1P40582 234 aa1.89□□□□□ -2.11
SIN3YOL004W AVO2Q04749 426 aa1.89□□□□□ -2.11
SIN3YOL004W YHR213W-AQ8TGT4 77 aa1.89□□□□□ -2.11
SIN3YOL004W CYR1P08678 2026 aaKnown RBP1.89□□□□□ -2.11
SIN3YOL004W YEL045CP32616 141 aa1.89□□□□□ -2.11
SIN3YOL004W HRT1Q08273 121 aa1.89□□□□□ -2.11
SIN3YOL004W QCR10P37299 77 aa1.89□□□□□ -2.11
SIN3YOL004W YPR153WQ06537 140 aa1.89□□□□□ -2.11
SIN3YOL004W HUR1P45820 110 aa1.89□□□□□ -2.11
SIN3YOL004W YDL241WQ07738 123 aa1.89□□□□□ -2.11
SIN3YOL004W RPL26AP05743 127 aaKnown RBP1.88□□□□□ -2.11
SIN3YOL004W RPL26BP53221 127 aaKnown RBP1.88□□□□□ -2.11
SIN3YOL004W NMA1Q06178 401 aaKnown RBP1.88□□□□□ -2.11
SIN3YOL004W FEX1Q08913 375 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms