RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YGL258W-AQ3E740 77 aa5.06□□□□□ -1.6
HDA1YNL021W ATP20Q12233 115 aa5.05□□□□□ -1.6
HDA1YNL021W YOR097CQ12274 175 aaPredicted RBP5.05□□□□□ -1.6
HDA1YNL021W SFT2P38166 215 aa5.05□□□□□ -1.6
HDA1YNL021W ERV14P53173 138 aa5.05□□□□□ -1.6
HDA1YNL021W HAL1Q01766 294 aa5.05□□□□□ -1.6
HDA1YNL021W YPR063CQ12160 140 aa5.05□□□□□ -1.6
HDA1YNL021W YOS1Q3E834 85 aa5.05□□□□□ -1.6
HDA1YNL021W IRA1P18963 3092 aa5.05□□□□□ -1.6
HDA1YNL021W POR1P04840 283 aaKnown RBP5.04□□□□□ -1.6
HDA1YNL021W DSK2P48510 373 aa5.04□□□□□ -1.6
HDA1YNL021W YGR269WP40326 108 aa5.03□□□□□ -1.6
HDA1YNL021W RPS25BP0C0T4 108 aaKnown RBP5.03□□□□□ -1.6
HDA1YNL021W TMC1Q08422 150 aaPredicted RBP5.03□□□□□ -1.6
HDA1YNL021W RPS25AQ3E792 108 aaPredicted RBP5.03□□□□□ -1.6
HDA1YNL021W GCN1P33892 2672 aaKnown RBP5.03□□□□□ -1.6
HDA1YNL021W HAP3P13434 144 aa5.02□□□□□ -1.61
HDA1YNL021W QCR9P22289 66 aa5.02□□□□□ -1.61
HDA1YNL021W NSA2P40078 261 aaKnown RBP5.02□□□□□ -1.61
HDA1YNL021W YNR064CP53750 290 aa5.02□□□□□ -1.61
HDA1YNL021W PAU4P53427 120 aa5.02□□□□□ -1.61
HDA1YNL021W YML122CQ03207 126 aa5.01□□□□□ -1.61
HDA1YNL021W YCL048W-AQ2V2Q2 79 aa5.01□□□□□ -1.61
HDA1YNL021W YGR164WP53291 111 aa5□□□□□ -1.61
HDA1YNL021W PAU1P0CE88 120 aa5□□□□□ -1.61
HDA1YNL021W PAU14P0CE89 120 aa5□□□□□ -1.61
HDA1YNL021W PAU6P0CE90 120 aa5□□□□□ -1.61
HDA1YNL021W PAU18P0CE91 120 aa5□□□□□ -1.61
HDA1YNL021W PAU8P0CE92 120 aa5□□□□□ -1.61
HDA1YNL021W PAU11P0CE93 120 aa5□□□□□ -1.61
HDA1YNL021W NOP1P15646 327 aaKnown RBP5□□□□□ -1.61
HDA1YNL021W FPR2P32472 135 aa5□□□□□ -1.61
HDA1YNL021W ATG8P38182 117 aaRIP-Chip data5□□□□□ -1.61not detected
HDA1YNL021W PAU13P38725 120 aa5□□□□□ -1.61
HDA1YNL021W PAU10Q03050 120 aa5□□□□□ -1.61
HDA1YNL021W AVO2Q04749 426 aa5□□□□□ -1.61
HDA1YNL021W PAU20Q08322 120 aa5□□□□□ -1.61
HDA1YNL021W POC4Q12245 148 aaPredicted RBP5□□□□□ -1.61
HDA1YNL021W YPR145C-AQ2V2P0 78 aa5□□□□□ -1.61
HDA1YNL021W PAU9Q3E770 120 aa5□□□□□ -1.61
HDA1YNL021W RAD6P06104 172 aa4.99□□□□□ -1.61
HDA1YNL021W DDR48P18899 430 aaKnown RBP4.99□□□□□ -1.61
HDA1YNL021W YEL045CP32616 141 aa4.99□□□□□ -1.61
HDA1YNL021W MRPS9P38120 278 aa4.99□□□□□ -1.61
HDA1YNL021W VMA21P41806 77 aa4.99□□□□□ -1.61
HDA1YNL021W YGR026WP53217 278 aa4.99□□□□□ -1.61
HDA1YNL021W YMR007WQ03675 126 aa4.99□□□□□ -1.61
HDA1YNL021W MIX17Q03667 156 aa4.98□□□□□ -1.61
HDA1YNL021W SHH3Q04487 196 aa4.98□□□□□ -1.61
HDA1YNL021W YOR376W-AQ3E805 51 aa4.98□□□□□ -1.61
HDA1YNL021W YCR050CP25630 102 aa4.97□□□□□ -1.61
HDA1YNL021W MIC27P50945 234 aa4.97□□□□□ -1.61
HDA1YNL021W HMRA1P0CY11 126 aa4.97□□□□□ -1.61
HDA1YNL021W PAM17P36147 197 aa4.97□□□□□ -1.61
HDA1YNL021W PAU15P40585 124 aa4.97□□□□□ -1.61
HDA1YNL021W YIR020CP40575 100 aa4.96□□□□□ -1.62
HDA1YNL021W DAN1P47178 298 aa4.96□□□□□ -1.62
HDA1YNL021W RPS22AP0C0W1 130 aaKnown RBP4.96□□□□□ -1.62
HDA1YNL021W RRT1P38192 103 aa4.96□□□□□ -1.62
HDA1YNL021W YER135CP40082 130 aa4.95□□□□□ -1.62
HDA1YNL021W LST8P41318 303 aa4.95□□□□□ -1.62
HDA1YNL021W YNR077CP53758 84 aa4.95□□□□□ -1.62
HDA1YNL021W CSI2Q08054 341 aa4.95□□□□□ -1.62
HDA1YNL021W YDR029WQ12111 104 aa4.95□□□□□ -1.62
HDA1YNL021W YKR032WP36127 104 aa4.94□□□□□ -1.62
HDA1YNL021W HSP10P38910 106 aa4.94□□□□□ -1.62
HDA1YNL021W YHP1Q04116 353 aa4.94□□□□□ -1.62
HDA1YNL021W SOD1P00445 154 aaKnown RBP4.93□□□□□ -1.62
HDA1YNL021W RPL43AP0CX25 92 aaKnown RBP4.93□□□□□ -1.62
HDA1YNL021W RPL43BP0CX26 92 aa4.93□□□□□ -1.62
HDA1YNL021W YKR045CP36138 183 aa4.93□□□□□ -1.62
HDA1YNL021W YBL071CP38185 102 aa4.93□□□□□ -1.62
HDA1YNL021W CYB5P40312 120 aa4.93□□□□□ -1.62
HDA1YNL021W MRPS8Q03799 155 aa4.93□□□□□ -1.62
HDA1YNL021W TEL1P38110 2787 aa4.93□□□□□ -1.62
HDA1YNL021W PRP8P33334 2413 aaKnown RBP4.93□□□□□ -1.62
HDA1YNL021W YGL010WP25338 174 aa4.93□□□□□ -1.62
HDA1YNL021W YBR013CP38215 129 aa4.92□□□□□ -1.62
HDA1YNL021W KSH1Q8TGJ3 72 aa4.92□□□□□ -1.62
HDA1YNL021W YAL064WP39711 94 aa4.91□□□□□ -1.62
HDA1YNL021W SPG1P50088 95 aa4.91□□□□□ -1.62
HDA1YNL021W BPH1P25356 2167 aa4.91□□□□□ -1.62
HDA1YNL021W TOR1P35169 2470 aa4.91□□□□□ -1.62
HDA1YNL021W FZF1P32805 299 aa4.9□□□□□ -1.62
HDA1YNL021W LSM2P38203 95 aaKnown RBP4.9□□□□□ -1.62
HDA1YNL021W PAU5P43575 122 aa4.9□□□□□ -1.62
HDA1YNL021W YJL027CP47063 138 aaPredicted RBP4.9□□□□□ -1.62
HDA1YNL021W YOR381W-AQ3E804 55 aa4.9□□□□□ -1.62
HDA1YNL021W PAU19P0CE85 124 aa4.9□□□□□ -1.63
HDA1YNL021W PAU21P0CE86 164 aa4.9□□□□□ -1.63
HDA1YNL021W PAU22P0CE87 164 aa4.9□□□□□ -1.63
HDA1YNL021W PAU3P25610 124 aa4.9□□□□□ -1.63
HDA1YNL021W SEN15Q04675 128 aa4.9□□□□□ -1.63
HDA1YNL021W Q0297Q9ZZV8 51 aa4.9□□□□□ -1.63
HDA1YNL021W CUP1-1P0CX80 61 aa4.89□□□□□ -1.63
HDA1YNL021W CUP1-2P0CX81 61 aa4.89□□□□□ -1.63
HDA1YNL021W MRPL38P35996 138 aaPredicted RBP4.89□□□□□ -1.63
HDA1YNL021W MRPL11P36521 249 aaPredicted RBP4.89□□□□□ -1.63
HDA1YNL021W YHR173CP38864 112 aa4.89□□□□□ -1.63
HDA1YNL021W YIL163CP40448 117 aa4.88□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms