RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W SCP1Q08873 200 aa-0.41□□□□□ -2.48
PRP39YML046W YMR030W-AQ3E760 96 aa-0.41□□□□□ -2.48
PRP39YML046W RPL24AP04449 155 aaKnown RBP-0.42□□□□□ -2.48
PRP39YML046W BET1P22804 142 aa-0.42□□□□□ -2.48
PRP39YML046W RPL24BP24000 155 aaKnown RBP-0.42□□□□□ -2.48
PRP39YML046W BUB2P26448 306 aaPredicted RBP-0.42□□□□□ -2.48
PRP39YML046W YBL044WP38194 122 aa-0.42□□□□□ -2.48
PRP39YML046W BFR1P38934 470 aaKnown RBP RIP-Chip data-0.42□□□□□ -2.48 RIP-Chip
PRP39YML046W SEC72P39742 193 aaKnown RBP-0.42□□□□□ -2.48
PRP39YML046W GPI14P47088 403 aaKnown RBP-0.42□□□□□ -2.48
PRP39YML046W YMR175W-AQ3E766 64 aa-0.42□□□□□ -2.48
PRP39YML046W LSO2Q3E772 92 aaKnown RBP-0.42□□□□□ -2.48
PRP39YML046W YOR072W-BQ3E832 53 aa-0.42□□□□□ -2.48
PRP39YML046W CBF1P17106 351 aa-0.43□□□□□ -2.48
PRP39YML046W FUN14P18411 198 aa-0.43□□□□□ -2.48
PRP39YML046W RPA12P32529 125 aaKnown RBP-0.43□□□□□ -2.48
PRP39YML046W ATG8P38182 117 aaRIP-Chip data-0.43□□□□□ -2.48not detected
PRP39YML046W YBR090CP38253 122 aa-0.43□□□□□ -2.48
PRP39YML046W SHU1P38751 150 aa-0.43□□□□□ -2.48
PRP39YML046W YHR138CP38841 114 aaPredicted RBP-0.43□□□□□ -2.48
PRP39YML046W CWC23P52868 283 aaPredicted RBP-0.43□□□□□ -2.48
PRP39YML046W USE1P53146 245 aa-0.43□□□□□ -2.48
PRP39YML046W BRP1P53194 125 aa-0.43□□□□□ -2.48
PRP39YML046W MRPL50P53724 139 aa-0.43□□□□□ -2.48
PRP39YML046W YNL184CP53876 108 aa-0.43□□□□□ -2.48
PRP39YML046W YML108WQ03759 105 aa-0.43□□□□□ -2.48
PRP39YML046W SDH7Q04401 133 aa-0.43□□□□□ -2.48
PRP39YML046W SPC3Q12133 184 aa-0.43□□□□□ -2.48
PRP39YML046W PCC1Q3E833 88 aa-0.43□□□□□ -2.48
PRP39YML046W COA6Q3E846 104 aa-0.43□□□□□ -2.48
PRP39YML046W STF1P01098 86 aa-0.44□□□□□ -2.48
PRP39YML046W YLR157W-DP0CE99 70 aa-0.44□□□□□ -2.48
PRP39YML046W SEC59P20048 519 aa-0.44□□□□□ -2.48
PRP39YML046W CKS1P20486 150 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W MRP49P32388 137 aa-0.44□□□□□ -2.48
PRP39YML046W YBL071CP38185 102 aa-0.44□□□□□ -2.48
PRP39YML046W YGR269WP40326 108 aa-0.44□□□□□ -2.48
PRP39YML046W LIA1P47120 325 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W ORM1P53224 222 aa-0.44□□□□□ -2.48
PRP39YML046W DYN2Q02647 92 aa-0.44□□□□□ -2.48
PRP39YML046W CSN9Q03981 162 aa-0.44□□□□□ -2.48
PRP39YML046W HNT1Q04344 158 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W SHH3Q04487 196 aa-0.44□□□□□ -2.48
PRP39YML046W YOR015WQ12169 119 aa-0.44□□□□□ -2.48
PRP39YML046W SNU23Q12368 194 aaPredicted RBP-0.44□□□□□ -2.48
PRP39YML046W ADF1Q2V2Q1 113 aa-0.44□□□□□ -2.48
PRP39YML046W SEC4P07560 215 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W MATALPHA1P0CY06 175 aa-0.44□□□□□ -2.48
PRP39YML046W HMLALPHA1P0CY07 175 aa-0.44□□□□□ -2.48
PRP39YML046W GCN3P14741 305 aa-0.44□□□□□ -2.48
PRP39YML046W IDP1P21954 428 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W YCR090CP25654 182 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W LHP1P33399 275 aaKnown RBP-0.44□□□□□ -2.48
PRP39YML046W ATX1P38636 73 aa-0.44□□□□□ -2.48
PRP39YML046W IPI1P38803 334 aaPredicted RBP-0.44□□□□□ -2.48
PRP39YML046W YEA6P39953 335 aa-0.44□□□□□ -2.48
PRP39YML046W SPC25P40014 221 aa-0.44□□□□□ -2.48
PRP39YML046W GLC8P41818 229 aa-0.44□□□□□ -2.48
PRP39YML046W AIM11P87275 137 aa-0.44□□□□□ -2.48
PRP39YML046W DYN3Q04949 312 aa-0.44□□□□□ -2.48
PRP39YML046W YOL014WQ08110 124 aa-0.44□□□□□ -2.48
PRP39YML046W CSM4Q08955 156 aa-0.44□□□□□ -2.48
PRP39YML046W YDL157CQ12082 118 aa-0.44□□□□□ -2.48
PRP39YML046W YLR118CQ12354 227 aa-0.44□□□□□ -2.48
PRP39YML046W RPS25BP0C0T4 108 aaKnown RBP-0.45□□□□□ -2.48
PRP39YML046W NTF2P33331 125 aaKnown RBP-0.45□□□□□ -2.48
PRP39YML046W PET100P38958 111 aa-0.45□□□□□ -2.48
PRP39YML046W YEL014CP39999 101 aa-0.45□□□□□ -2.48
PRP39YML046W YER187WP40102 141 aa-0.45□□□□□ -2.48
PRP39YML046W GNA1P43577 159 aaPredicted RBP-0.45□□□□□ -2.48
PRP39YML046W FAR7P43592 221 aa-0.45□□□□□ -2.48
PRP39YML046W BNA6P43619 295 aa-0.45□□□□□ -2.48
PRP39YML046W IMP2P46972 177 aa-0.45□□□□□ -2.48
PRP39YML046W PLP1Q04004 230 aa-0.45□□□□□ -2.48
PRP39YML046W IRC21Q04772 201 aa-0.45□□□□□ -2.48
PRP39YML046W ATG31Q12421 196 aa-0.45□□□□□ -2.48
PRP39YML046W YGL258W-AQ3E740 77 aa-0.45□□□□□ -2.48
PRP39YML046W RPS25AQ3E792 108 aaPredicted RBP-0.45□□□□□ -2.48
PRP39YML046W YOR381W-AQ3E804 55 aa-0.45□□□□□ -2.48
PRP39YML046W YBL039W-BP0C268 59 aa-0.46□□□□□ -2.48
PRP39YML046W MAG1P22134 296 aaKnown RBP-0.46□□□□□ -2.48
PRP39YML046W BUD23P25627 275 aaPredicted RBP-0.46□□□□□ -2.48
PRP39YML046W DLS1P40366 167 aa-0.46□□□□□ -2.48
PRP39YML046W MIC27P50945 234 aa-0.46□□□□□ -2.48
PRP39YML046W MPC1P53157 130 aaKnown RBP-0.46□□□□□ -2.48
PRP39YML046W YPR153WQ06537 140 aa-0.46□□□□□ -2.48
PRP39YML046W ATP20Q12233 115 aa-0.46□□□□□ -2.48
PRP39YML046W ATP14Q12349 124 aa-0.46□□□□□ -2.48
PRP39YML046W QCR2P07257 368 aa-0.46□□□□□ -2.48
PRP39YML046W YCR016WP25617 290 aaKnown RBP-0.46□□□□□ -2.48
PRP39YML046W YUH1P35127 236 aa-0.46□□□□□ -2.48
PRP39YML046W SKI6P46948 246 aaPredicted RBP-0.46□□□□□ -2.48
PRP39YML046W YGR042WP53227 271 aa-0.46□□□□□ -2.48
PRP39YML046W MRPS12P53732 153 aa-0.46□□□□□ -2.48
PRP39YML046W LSM7P53905 115 aaKnown RBP-0.46□□□□□ -2.48
PRP39YML046W ARL3Q02804 198 aa-0.46□□□□□ -2.48
PRP39YML046W YML079WQ03629 201 aa-0.46□□□□□ -2.48
PRP39YML046W YMR122CQ03879 124 aa-0.46□□□□□ -2.48
PRP39YML046W YOL097W-AQ3E7Y9 61 aa-0.46□□□□□ -2.48
PRP39YML046W YML100W-AQ8TGT0 57 aa-0.46□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms