RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W BRP1P53194 125 aa1.47□□□□□ -2.17
NOP56YLR197W RPA190P10964 1664 aaKnown RBP1.47□□□□□ -2.17
NOP56YLR197W BPT1P14772 1559 aa1.47□□□□□ -2.17
NOP56YLR197W DNF1P32660 1571 aa1.47□□□□□ -2.17
NOP56YLR197W TY3B-IQ7LHG5 1498 aaKnown RBP1.47□□□□□ -2.17
NOP56YLR197W PAU21P0CE86 164 aa1.46□□□□□ -2.18
NOP56YLR197W PAU22P0CE87 164 aa1.46□□□□□ -2.18
NOP56YLR197W LSM2P38203 95 aaKnown RBP1.46□□□□□ -2.18
NOP56YLR197W YBR027CP38220 110 aa1.46□□□□□ -2.18
NOP56YLR197W FIT3Q08907 204 aa1.46□□□□□ -2.18
NOP56YLR197W PRM3Q08931 133 aa1.46□□□□□ -2.18
NOP56YLR197W YPR203WQ08994 102 aa1.46□□□□□ -2.18
NOP56YLR197W YDR029WQ12111 104 aa1.46□□□□□ -2.18
NOP56YLR197W YOR376W-AQ3E805 51 aa1.46□□□□□ -2.18
NOP56YLR197W KSH1Q8TGJ3 72 aa1.46□□□□□ -2.18
NOP56YLR197W ECM29P38737 1868 aa1.46□□□□□ -2.18
NOP56YLR197W MLP1Q02455 1875 aaKnown RBP1.46□□□□□ -2.18
NOP56YLR197W ATG8P38182 117 aaRIP-Chip data1.45□□□□□ -2.18not detected
NOP56YLR197W YOL131WQ08270 108 aa1.45□□□□□ -2.18
NOP56YLR197W POC4Q12245 148 aaPredicted RBP1.45□□□□□ -2.18
NOP56YLR197W MED11Q99278 115 aa1.45□□□□□ -2.18
NOP56YLR197W TY3B-GQ99315 1547 aa1.45□□□□□ -2.18
NOP56YLR197W FKS3Q04952 1785 aa1.45□□□□□ -2.18
NOP56YLR197W BCK1Q01389 1478 aa1.45□□□□□ -2.18
NOP56YLR197W GCN2P15442 1659 aa1.45□□□□□ -2.18
NOP56YLR197W CDC25P04821 1589 aa1.45□□□□□ -2.18
NOP56YLR197W VTH1P40438 1549 aa1.45□□□□□ -2.18
NOP56YLR197W VTH2P40890 1549 aa1.45□□□□□ -2.18
NOP56YLR197W PAI3P01094 68 aa1.45□□□□□ -2.18
NOP56YLR197W UBC4P15731 148 aa1.45□□□□□ -2.18
NOP56YLR197W YKL044WP36092 106 aa1.45□□□□□ -2.18
NOP56YLR197W CWP2P43497 92 aa1.45□□□□□ -2.18
NOP56YLR197W YFL051CP43552 160 aa1.45□□□□□ -2.18
NOP56YLR197W SED1Q01589 338 aa1.45□□□□□ -2.18
NOP56YLR197W YIL134C-AQ45U18 67 aa1.45□□□□□ -2.18
NOP56YLR197W ACC1Q00955 2233 aaKnown RBP1.44□□□□□ -2.18
NOP56YLR197W ECM12O13529 151 aa1.44□□□□□ -2.18
NOP56YLR197W RPL33AP05744 107 aaKnown RBP1.44□□□□□ -2.18
NOP56YLR197W MRPL11P36521 249 aaPredicted RBP1.44□□□□□ -2.18
NOP56YLR197W SNF11P38956 169 aa1.44□□□□□ -2.18
NOP56YLR197W SWM2P40342 146 aa1.44□□□□□ -2.18
NOP56YLR197W YMR090WQ04304 227 aaKnown RBP1.44□□□□□ -2.18
NOP56YLR197W YPR145C-AQ2V2P0 78 aa1.44□□□□□ -2.18
NOP56YLR197W YNR034W-AQ3E841 98 aa1.44□□□□□ -2.18
NOP56YLR197W HIR3P47171 1648 aa1.44□□□□□ -2.18
NOP56YLR197W PDR5P33302 1511 aaKnown RBP1.43□□□□□ -2.18
NOP56YLR197W YGL014C-AP0C5N1 53 aa1.43□□□□□ -2.18
NOP56YLR197W YHR213WP0CI67 198 aa1.43□□□□□ -2.18
NOP56YLR197W YCR099CP25657 155 aa1.43□□□□□ -2.18
NOP56YLR197W TDA2P40045 126 aa1.43□□□□□ -2.18
NOP56YLR197W CYB5P40312 120 aa1.43□□□□□ -2.18
NOP56YLR197W YFR035CP43608 114 aa1.43□□□□□ -2.18
NOP56YLR197W YMR007WQ03675 126 aa1.43□□□□□ -2.18
NOP56YLR197W GPI19Q04082 140 aa1.43□□□□□ -2.18
NOP56YLR197W RRT15Q3E811 62 aa1.43□□□□□ -2.18
NOP56YLR197W PCC1Q3E833 88 aa1.43□□□□□ -2.18
NOP56YLR197W COA6Q3E846 104 aa1.43□□□□□ -2.18
NOP56YLR197W RPL36BO14455 100 aaKnown RBP1.42□□□□□ -2.18
NOP56YLR197W RPL36AP05745 100 aaPredicted RBP1.42□□□□□ -2.18
NOP56YLR197W YCR085WP25650 117 aa1.42□□□□□ -2.18
NOP56YLR197W YHL037CP38733 133 aa1.42□□□□□ -2.18
NOP56YLR197W YNL198CP40166 100 aa1.42□□□□□ -2.18
NOP56YLR197W EMC5P40540 141 aa1.42□□□□□ -2.18
NOP56YLR197W MSL1P40567 111 aaPredicted RBP1.42□□□□□ -2.18
NOP56YLR197W ATG2P53855 1592 aa1.42□□□□□ -2.18
NOP56YLR197W YLR296WQ05898 108 aa1.42□□□□□ -2.18
NOP56YLR197W PAU23Q07987 124 aa1.42□□□□□ -2.18
NOP56YLR197W PAU17Q12370 124 aa1.42□□□□□ -2.18
NOP56YLR197W YMR175W-AQ3E766 64 aa1.42□□□□□ -2.18
NOP56YLR197W MIC10Q96VH5 97 aa1.42□□□□□ -2.18
NOP56YLR197W YBT1P32386 1661 aa1.42□□□□□ -2.18
NOP56YLR197W RPL40AP0CH08 128 aaKnown RBP1.41□□□□□ -2.18
NOP56YLR197W RPL40BP0CH09 128 aaKnown RBP1.41□□□□□ -2.18
NOP56YLR197W RPA12P32529 125 aaKnown RBP1.41□□□□□ -2.18
NOP56YLR197W YHR138CP38841 114 aaPredicted RBP1.41□□□□□ -2.18
NOP56YLR197W SMX2P40204 77 aaKnown RBP1.41□□□□□ -2.18
NOP56YLR197W YMR122CQ03879 124 aa1.41□□□□□ -2.18
NOP56YLR197W YDR119W-AQ2V2P9 66 aa1.41□□□□□ -2.18
NOP56YLR197W VMA9Q3E7B6 73 aa1.41□□□□□ -2.18
NOP56YLR197W ENV10Q99382 181 aa1.41□□□□□ -2.18
NOP56YLR197W APC1P53886 1748 aa1.41□□□□□ -2.18
NOP56YLR197W RTC6O14464 93 aa1.4□□□□□ -2.18
NOP56YLR197W PFY1P07274 126 aa1.4□□□□□ -2.18
NOP56YLR197W LST8P41318 303 aa1.4□□□□□ -2.18
NOP56YLR197W YDR042CQ03205 200 aa1.4□□□□□ -2.18
NOP56YLR197W SNF2P22082 1703 aa1.4□□□□□ -2.18
NOP56YLR197W RIF1P29539 1916 aa1.4□□□□□ -2.19
NOP56YLR197W KOG1P38873 1557 aa1.4□□□□□ -2.19
NOP56YLR197W LAA1P39526 2014 aa1.4□□□□□ -2.19
NOP56YLR197W YOR093CQ12275 1648 aa1.4□□□□□ -2.19
NOP56YLR197W MIX14Q04341 121 aa1.4□□□□□ -2.19
NOP56YLR197W IRC21Q04772 201 aa1.4□□□□□ -2.19
NOP56YLR197W YLR365WQ7LIF2 110 aa1.4□□□□□ -2.19
NOP56YLR197W RIM15P43565 1770 aa1.39□□□□□ -2.19
NOP56YLR197W GSC2P40989 1895 aa1.39□□□□□ -2.19
NOP56YLR197W CDC39P25655 2108 aaKnown RBP1.39□□□□□ -2.19
NOP56YLR197W RPL22AP05749 121 aaKnown RBP1.39□□□□□ -2.19
NOP56YLR197W MRP17P28778 131 aa1.39□□□□□ -2.19
NOP56YLR197W VMA21P41806 77 aa1.39□□□□□ -2.19
NOP56YLR197W RSM19P53733 91 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 94.3 ms