RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	YBR013C	P38215	129 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	DER1	P38307	211 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	YHL037C	P38733	133 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	YGR269W	P40326	108 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	EMC5	P40540	141 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	GNA1	P43577	159 aa	Predicted RBP	0.91	□□□□□ -2.26
SPE1	YKL184W	SIP18	P50263	79 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	YCL001W-A	P87012	153 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	SED1	Q01589	338 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	YDC1	Q02896	317 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	AVO2	Q04749	426 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	COX19	Q3E731	98 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	PCC1	Q3E833	88 aa		0.91	□□□□□ -2.26
SPE1	YKL184W	YCR101C	P25607	182 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	SRB6	P32570	121 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	RPL14A	P36105	138 aa	Known RBP	0.9	□□□□□ -2.26
SPE1	YKL184W	ATG8	P38182	117 aa	RIP-Chip data	0.9	□□□□□ -2.26	not detected
SPE1	YKL184W	RPL14B	P38754	138 aa	Known RBP	0.9	□□□□□ -2.26
SPE1	YKL184W	VMA21	P41806	77 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	RPL37A	P49166	88 aa	Known RBP	0.9	□□□□□ -2.26
SPE1	YKL184W	GEP7	P53171	287 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	YNR064C	P53750	290 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	DYN2	Q02647	92 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	TMA23	Q03525	211 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	YMR007W	Q03675	126 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	FCF2	Q12035	217 aa	Predicted RBP	0.9	□□□□□ -2.26
SPE1	YKL184W	POC4	Q12245	148 aa	Predicted RBP	0.9	□□□□□ -2.26
SPE1	YKL184W	YCL048W-A	Q2V2Q2	79 aa		0.9	□□□□□ -2.26
SPE1	YKL184W	RPS25B	P0C0T4	108 aa	Known RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	PBI2	P0CT04	75 aa	Known RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	SHB17	P36136	271 aa	Known RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	YBR090C	P38253	122 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	TRS20	P38334	175 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	PRS3	P38689	320 aa	Known RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	SWM2	P40342	146 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YIL163C	P40448	117 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	HHO1	P53551	258 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YMR090W	Q04304	227 aa	Known RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	FRQ1	Q06389	190 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	FCY1	Q12178	158 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	RPS25A	Q3E792	108 aa	Predicted RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	YOS1	Q3E834	85 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	RPL43A	P0CX25	92 aa	Known RBP	0.89	□□□□□ -2.27
SPE1	YKL184W	RPL43B	P0CX26	92 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YBR292C	P38357	123 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	PAU15	P40585	124 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	PHS1	P40857	217 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	LST8	P41318	303 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	FIP1	P45976	327 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YJR015W	P47090	510 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YGR025W	P53216	100 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	PAU4	P53427	120 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YPL067C	Q02754	198 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	ARL3	Q02804	198 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	SEN15	Q04675	128 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YDL241W	Q07738	123 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	YGL258W-A	Q3E740	77 aa		0.89	□□□□□ -2.27
SPE1	YKL184W	MDN1	Q12019	4910 aa	Known RBP	0.88	□□□□□ -2.27
SPE1	YKL184W	PAU1	P0CE88	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU14	P0CE89	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU6	P0CE90	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU18	P0CE91	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU8	P0CE92	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU11	P0CE93	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	YHR213W	P0CI67	198 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	SRP21	P32342	167 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	LSM2	P38203	95 aa	Known RBP	0.88	□□□□□ -2.27
SPE1	YKL184W	YPT31	P38555	223 aa	Known RBP	0.88	□□□□□ -2.27
SPE1	YKL184W	PAU13	P38725	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	YHR138C	P38841	114 aa	Predicted RBP	0.88	□□□□□ -2.27
SPE1	YKL184W	SNU13	P39990	126 aa	Known RBP	0.88	□□□□□ -2.27
SPE1	YKL184W	YIR020C	P40575	100 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	GTT1	P40582	234 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	CIN5	P40917	295 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	MOG1	P47123	218 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	TOM7	P53507	60 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU10	Q03050	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	YPD1	Q07688	167 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU20	Q08322	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	YLR118C	Q12354	227 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	PAU9	Q3E770	120 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	Q0297	Q9ZZV8	51 aa		0.88	□□□□□ -2.27
SPE1	YKL184W	FMP49	A0A023PZB3	126 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	RPS22A	P0C0W1	130 aa	Known RBP	0.87	□□□□□ -2.27
SPE1	YKL184W	NHP6A	P11632	93 aa	Known RBP	0.87	□□□□□ -2.27
SPE1	YKL184W	SEC59	P20048	519 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	PRE1	P22141	198 aa	Known RBP	0.87	□□□□□ -2.27
SPE1	YKL184W	QCR9	P22289	66 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	YMR141C	P40211	102 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	PAU5	P43575	122 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	GPI2	P46961	280 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	MIC27	P50945	234 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	RAV2	Q03956	351 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	YNR034W-A	Q3E841	98 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	YCL001W-B	Q96VH2	84 aa		0.87	□□□□□ -2.27
SPE1	YKL184W	PAU19	P0CE85	124 aa		0.86	□□□□□ -2.27
SPE1	YKL184W	PAU21	P0CE86	164 aa		0.86	□□□□□ -2.27
SPE1	YKL184W	PAU22	P0CE87	164 aa		0.86	□□□□□ -2.27
SPE1	YKL184W	PAU3	P25610	124 aa		0.86	□□□□□ -2.27
SPE1	YKL184W	FPR2	P32472	135 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms