RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C PAU3P25610 124 aa0.68□□□□□ -2.3
VPS55YJR044C SRB6P32570 121 aa0.68□□□□□ -2.3
VPS55YJR044C PAU2P32612 120 aa0.68□□□□□ -2.3
VPS55YJR044C YBR013CP38215 129 aa0.68□□□□□ -2.3
VPS55YJR044C AIM4P38305 123 aaPredicted RBP0.68□□□□□ -2.3
VPS55YJR044C SSN2P38931 1420 aa0.68□□□□□ -2.3
VPS55YJR044C YHR213W-BQ8TGK1 99 aa0.68□□□□□ -2.3
VPS55YJR044C RSF2P46974 1380 aa0.68□□□□□ -2.3
VPS55YJR044C PAU24P38155 120 aa0.67□□□□□ -2.3
VPS55YJR044C EMC5P40540 141 aa0.67□□□□□ -2.3
VPS55YJR044C MIC27P50945 234 aa0.67□□□□□ -2.3
VPS55YJR044C NHP10Q03435 203 aa0.67□□□□□ -2.3
VPS55YJR044C YOL118CQ08259 102 aa0.67□□□□□ -2.3
VPS55YJR044C COX19Q3E731 98 aa0.67□□□□□ -2.3
VPS55YJR044C SEC16P48415 2195 aaKnown RBP0.67□□□□□ -2.3
VPS55YJR044C LAA1P39526 2014 aa0.67□□□□□ -2.3
VPS55YJR044C URA2P07259 2214 aaKnown RBP0.66□□□□□ -2.3
VPS55YJR044C SWR1Q05471 1514 aa0.66□□□□□ -2.3
VPS55YJR044C PAU16P35994 123 aa0.66□□□□□ -2.3
VPS55YJR044C CYB5P40312 120 aa0.66□□□□□ -2.3
VPS55YJR044C MSL1P40567 111 aaPredicted RBP0.66□□□□□ -2.3
VPS55YJR044C PAU15P40585 124 aa0.66□□□□□ -2.3
VPS55YJR044C IMP2P46972 177 aa0.66□□□□□ -2.3
VPS55YJR044C LSM6Q06406 86 aaKnown RBP0.66□□□□□ -2.3
VPS55YJR044C YLR285C-AQ3E771 56 aa0.66□□□□□ -2.3
VPS55YJR044C YCR075W-AQ3E830 75 aa0.66□□□□□ -2.3
VPS55YJR044C HUG1Q6Q5K6 68 aa0.66□□□□□ -2.3
VPS55YJR044C ENV10Q99382 181 aa0.66□□□□□ -2.3
VPS55YJR044C POL2P21951 2222 aaKnown RBP0.65□□□□□ -2.3
VPS55YJR044C SRB8P25648 1427 aa0.65□□□□□ -2.3
VPS55YJR044C ROX3P25046 220 aa0.65□□□□□ -2.31
VPS55YJR044C GCV3P39726 170 aaPredicted RBP0.65□□□□□ -2.31
VPS55YJR044C RPL37AP49166 88 aaKnown RBP0.65□□□□□ -2.31
VPS55YJR044C COX12Q01519 83 aa0.65□□□□□ -2.31
VPS55YJR044C YDR210WQ03482 75 aa0.65□□□□□ -2.31
VPS55YJR044C YMR082CQ04276 118 aa0.65□□□□□ -2.31
VPS55YJR044C TY4B-HP0C2J7 1802 aa0.64□□□□□ -2.31
VPS55YJR044C HMRA2P0CY13 119 aa0.64□□□□□ -2.31
VPS55YJR044C MRP17P28778 131 aa0.64□□□□□ -2.31
VPS55YJR044C RSM18P40033 138 aa0.64□□□□□ -2.31
VPS55YJR044C MRPS12P53732 153 aa0.64□□□□□ -2.31
VPS55YJR044C LCL2Q08045 131 aa0.64□□□□□ -2.31
VPS55YJR044C YDR029WQ12111 104 aa0.64□□□□□ -2.31
VPS55YJR044C SUS1Q6WNK7 96 aa0.64□□□□□ -2.31
VPS55YJR044C GDB1Q06625 1536 aa0.64□□□□□ -2.31
VPS55YJR044C YRF1-1P0CX20 1796 aa0.63□□□□□ -2.31
VPS55YJR044C YRF1-5P0CX21 1796 aa0.63□□□□□ -2.31
VPS55YJR044C YRF1-8P0CX22 1796 aa0.63□□□□□ -2.31
VPS55YJR044C HMRA1P0CY11 126 aa0.63□□□□□ -2.31
VPS55YJR044C YMR141CP40211 102 aa0.63□□□□□ -2.31
VPS55YJR044C AIM19P40502 157 aa0.63□□□□□ -2.31
VPS55YJR044C YIL086CP40503 102 aa0.63□□□□□ -2.31
VPS55YJR044C MVB12P42939 101 aa0.63□□□□□ -2.31
VPS55YJR044C YJR128WP47162 119 aa0.63□□□□□ -2.31
VPS55YJR044C YDR042CQ03205 200 aa0.63□□□□□ -2.31
VPS55YJR044C YSP2Q06681 1438 aa0.63□□□□□ -2.31
VPS55YJR044C ECM12O13529 151 aa0.62□□□□□ -2.31
VPS55YJR044C PDX3P38075 228 aaKnown RBP0.62□□□□□ -2.31
VPS55YJR044C YBR292CP38357 123 aa0.62□□□□□ -2.31
VPS55YJR044C HHY1P39982 102 aa0.62□□□□□ -2.31
VPS55YJR044C SNU13P39990 126 aaKnown RBP0.62□□□□□ -2.31
VPS55YJR044C RPL37BP51402 88 aaKnown RBP0.62□□□□□ -2.31
VPS55YJR044C YCR095W-AQ3E787 52 aa0.62□□□□□ -2.31
VPS55YJR044C YPL038W-AQ3E7B4 63 aa0.62□□□□□ -2.31
VPS55YJR044C MOT1P32333 1867 aa0.62□□□□□ -2.31
VPS55YJR044C TY1B-BRQ12193 1756 aa0.62□□□□□ -2.31
VPS55YJR044C YLR255CO13574 117 aa0.61□□□□□ -2.31
VPS55YJR044C PAU5P43575 122 aa0.61□□□□□ -2.31
VPS55YJR044C MRX7P53869 86 aa0.61□□□□□ -2.31
VPS55YJR044C SNA2P56508 79 aa0.61□□□□□ -2.31
VPS55YJR044C LCL1Q02786 101 aa0.61□□□□□ -2.31
VPS55YJR044C YOR034C-AQ3E735 80 aa0.61□□□□□ -2.31
VPS55YJR044C YMR175W-AQ3E766 64 aa0.61□□□□□ -2.31
VPS55YJR044C DNF3Q12674 1656 aa0.6□□□□□ -2.31
VPS55YJR044C RPA12P32529 125 aaKnown RBP0.6□□□□□ -2.31
VPS55YJR044C MRPL38P35996 138 aaPredicted RBP0.6□□□□□ -2.31
VPS55YJR044C SHU1P38751 150 aa0.6□□□□□ -2.31
VPS55YJR044C MPC2P38857 129 aa0.6□□□□□ -2.31
VPS55YJR044C ICY1Q04329 127 aa0.6□□□□□ -2.31
VPS55YJR044C YBR072C-AQ3E794 53 aa0.6□□□□□ -2.31
VPS55YJR044C RRT15Q3E811 62 aa0.6□□□□□ -2.31
VPS55YJR044C POL1P13382 1468 aa0.6□□□□□ -2.31
VPS55YJR044C RIM15P43565 1770 aa0.6□□□□□ -2.31
VPS55YJR044C YRF1-2P40105 1681 aa0.59□□□□□ -2.31
VPS55YJR044C MLP1Q02455 1875 aaKnown RBP0.59□□□□□ -2.31
VPS55YJR044C RPS11AP0CX47 156 aaKnown RBP0.59□□□□□ -2.31
VPS55YJR044C RPS11BP0CX48 156 aaKnown RBP0.59□□□□□ -2.31
VPS55YJR044C YDR010CQ12426 110 aa0.59□□□□□ -2.31
VPS55YJR044C YKL068W-AQ3E826 78 aa0.59□□□□□ -2.31
VPS55YJR044C TY1B-DR6P0C2I3 1755 aa0.59□□□□□ -2.32
VPS55YJR044C TY1B-LR2P0C2I5 1755 aa0.59□□□□□ -2.32
VPS55YJR044C TY1B-PR3P0C2J1 1755 aaKnown RBP0.59□□□□□ -2.32
VPS55YJR044C TY1B-JR2P47100 1755 aaKnown RBP0.59□□□□□ -2.32
VPS55YJR044C TY1B-MR1Q04214 1755 aa0.59□□□□□ -2.32
VPS55YJR044C TY1B-MR2Q04670 1755 aaKnown RBP0.59□□□□□ -2.32
VPS55YJR044C TY1B-NL1Q12112 1755 aa0.59□□□□□ -2.32
VPS55YJR044C TY1B-GR1Q12141 1755 aa0.59□□□□□ -2.32
VPS55YJR044C TY1B-GR3Q12316 1755 aa0.59□□□□□ -2.32
VPS55YJR044C TY1B-PLQ12414 1755 aaKnown RBP0.59□□□□□ -2.32
VPS55YJR044C TY1B-BLQ12490 1755 aa0.59□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms