RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YOL131WQ08270 108 aa0.71□□□□□ -2.3
PEP8YJL053W HUT1Q12520 339 aa0.71□□□□□ -2.3
PEP8YJL053W YKL018C-AQ3E7A7 99 aa0.71□□□□□ -2.3
PEP8YJL053W MHF2Q3E829 80 aa0.71□□□□□ -2.3
PEP8YJL053W Q0297Q9ZZV8 51 aa0.71□□□□□ -2.3
PEP8YJL053W MYO1P08964 1928 aa0.71□□□□□ -2.3
PEP8YJL053W CCW14O13547 238 aa0.7□□□□□ -2.3
PEP8YJL053W SUA7P29055 345 aaPredicted RBP0.7□□□□□ -2.3
PEP8YJL053W TIM12P32830 109 aa0.7□□□□□ -2.3
PEP8YJL053W YNL019CP53975 284 aa0.7□□□□□ -2.3
PEP8YJL053W YPL067CQ02754 198 aa0.7□□□□□ -2.3
PEP8YJL053W EST3Q03096 181 aa0.7□□□□□ -2.3
PEP8YJL053W SPC24Q04477 213 aa0.7□□□□□ -2.3
PEP8YJL053W YOR343CQ12484 108 aa0.7□□□□□ -2.3
PEP8YJL053W YKL068W-AQ3E826 78 aa0.7□□□□□ -2.3
PEP8YJL053W RIB3Q99258 208 aa0.7□□□□□ -2.3
PEP8YJL053W POL2P21951 2222 aaKnown RBP0.69□□□□□ -2.3
PEP8YJL053W HSP12P22943 109 aaKnown RBP0.69□□□□□ -2.3
PEP8YJL053W LHP1P33399 275 aaKnown RBP0.69□□□□□ -2.3
PEP8YJL053W RPS20P38701 121 aaKnown RBP0.69□□□□□ -2.3
PEP8YJL053W YIR020CP40575 100 aa0.69□□□□□ -2.3
PEP8YJL053W MOG1P47123 218 aa0.69□□□□□ -2.3
PEP8YJL053W PKR1Q03880 122 aaKnown RBP0.69□□□□□ -2.3
PEP8YJL053W SEN15Q04675 128 aa0.69□□□□□ -2.3
PEP8YJL053W SPC2Q04969 178 aa0.69□□□□□ -2.3
PEP8YJL053W FIT3Q08907 204 aa0.69□□□□□ -2.3
PEP8YJL053W YOR289WQ12012 251 aaPredicted RBP0.69□□□□□ -2.3
PEP8YJL053W RTR2Q12378 196 aa0.69□□□□□ -2.3
PEP8YJL053W COX9P07255 59 aa0.68□□□□□ -2.3
PEP8YJL053W PET54P10834 293 aa0.68□□□□□ -2.3
PEP8YJL053W YCR101CP25607 182 aa0.68□□□□□ -2.3
PEP8YJL053W HPM1P40481 377 aa0.68□□□□□ -2.3
PEP8YJL053W SPC3Q12133 184 aa0.68□□□□□ -2.3
PEP8YJL053W YGR035W-AQ45U48 73 aa0.68□□□□□ -2.3
PEP8YJL053W MOT1P32333 1867 aa0.67□□□□□ -2.3
PEP8YJL053W COX5BP00425 151 aa0.67□□□□□ -2.3
PEP8YJL053W ACP1P32463 125 aa0.67□□□□□ -2.3
PEP8YJL053W GNA1P43577 159 aaPredicted RBP0.67□□□□□ -2.3
PEP8YJL053W YGL204CP53089 101 aa0.67□□□□□ -2.3
PEP8YJL053W PAU12P53343 120 aa0.67□□□□□ -2.3
PEP8YJL053W PRM3Q08931 133 aa0.67□□□□□ -2.3
PEP8YJL053W YCL048W-AQ2V2Q2 79 aa0.67□□□□□ -2.3
PEP8YJL053W KTI11Q3E840 82 aa0.67□□□□□ -2.3
PEP8YJL053W MED11Q99278 115 aa0.67□□□□□ -2.3
PEP8YJL053W RPL39P04650 51 aa0.66□□□□□ -2.3
PEP8YJL053W ADK1P07170 222 aaKnown RBP0.66□□□□□ -2.3
PEP8YJL053W YGL014C-AP0C5N1 53 aa0.66□□□□□ -2.3
PEP8YJL053W HYM1P32464 399 aa0.66□□□□□ -2.3
PEP8YJL053W PAU2P32612 120 aa0.66□□□□□ -2.3
PEP8YJL053W PDX3P38075 228 aaKnown RBP0.66□□□□□ -2.3
PEP8YJL053W PAU24P38155 120 aa0.66□□□□□ -2.3
PEP8YJL053W YMR141CP40211 102 aa0.66□□□□□ -2.3
PEP8YJL053W LSM1P47017 172 aaKnown RBP0.66□□□□□ -2.3
PEP8YJL053W RBL2P48606 106 aaKnown RBP0.66□□□□□ -2.3
PEP8YJL053W DIE2P50076 525 aa0.66□□□□□ -2.3
PEP8YJL053W YMR105W-AQ8TGS8 64 aa0.66□□□□□ -2.3
PEP8YJL053W FYV5P25585 152 aa0.65□□□□□ -2.31
PEP8YJL053W YHR138CP38841 114 aaPredicted RBP0.65□□□□□ -2.31
PEP8YJL053W VPS55P47111 140 aa0.65□□□□□ -2.31
PEP8YJL053W YGR042WP53227 271 aa0.65□□□□□ -2.31
PEP8YJL053W HOR7Q05827 59 aa0.65□□□□□ -2.31
PEP8YJL053W COA6Q3E846 104 aa0.65□□□□□ -2.31
PEP8YJL053W ANB1P19211 157 aa0.64□□□□□ -2.31
PEP8YJL053W ROX3P25046 220 aa0.64□□□□□ -2.31
PEP8YJL053W FPR2P32472 135 aa0.64□□□□□ -2.31
PEP8YJL053W RPL14AP36105 138 aaKnown RBP0.64□□□□□ -2.31
PEP8YJL053W RPL14BP38754 138 aaKnown RBP0.64□□□□□ -2.31
PEP8YJL053W YHR140WP38842 239 aa0.64□□□□□ -2.31
PEP8YJL053W MPC2P38857 129 aa0.64□□□□□ -2.31
PEP8YJL053W YFR035CP43608 114 aa0.64□□□□□ -2.31
PEP8YJL053W SPG1P50088 95 aa0.64□□□□□ -2.31
PEP8YJL053W YCL001W-AP87012 153 aa0.64□□□□□ -2.31
PEP8YJL053W YDR366CP87287 132 aa0.64□□□□□ -2.31
PEP8YJL053W YMR122CQ03879 124 aa0.64□□□□□ -2.31
PEP8YJL053W NAT5Q08689 176 aa0.64□□□□□ -2.31
PEP8YJL053W YPL225WQ08971 146 aaKnown RBP0.64□□□□□ -2.31
PEP8YJL053W YLR099W-AQ3E798 87 aa0.64□□□□□ -2.31
PEP8YJL053W YPR108W-AQ3E7B3 70 aa0.64□□□□□ -2.31
PEP8YJL053W YLR365WQ7LIF2 110 aa0.64□□□□□ -2.31
PEP8YJL053W MRP17P28778 131 aa0.63□□□□□ -2.31
PEP8YJL053W MRPL38P35996 138 aaPredicted RBP0.63□□□□□ -2.31
PEP8YJL053W AIM4P38305 123 aaPredicted RBP0.63□□□□□ -2.31
PEP8YJL053W POR2P40478 281 aa0.63□□□□□ -2.31
PEP8YJL053W LSM8P47093 109 aaKnown RBP0.63□□□□□ -2.31
PEP8YJL053W SDH7Q04401 133 aa0.63□□□□□ -2.31
PEP8YJL053W SOM1Q05676 74 aa0.63□□□□□ -2.31
PEP8YJL053W SCP1Q08873 200 aa0.63□□□□□ -2.31
PEP8YJL053W YOR385WQ08909 290 aa0.63□□□□□ -2.31
PEP8YJL053W YGL258W-AQ3E740 77 aa0.63□□□□□ -2.31
PEP8YJL053W YOS1Q3E834 85 aa0.63□□□□□ -2.31
PEP8YJL053W SUS1Q6WNK7 96 aa0.63□□□□□ -2.31
PEP8YJL053W FUN14P18411 198 aa0.62□□□□□ -2.31
PEP8YJL053W MRPL44P19956 98 aa0.62□□□□□ -2.31
PEP8YJL053W BUD23P25627 275 aaPredicted RBP0.62□□□□□ -2.31
PEP8YJL053W AUA1P32450 94 aa0.62□□□□□ -2.31
PEP8YJL053W YBL071CP38185 102 aa0.62□□□□□ -2.31
PEP8YJL053W SNF11P38956 169 aa0.62□□□□□ -2.31
PEP8YJL053W YAL064WP39711 94 aa0.62□□□□□ -2.31
PEP8YJL053W SWM2P40342 146 aa0.62□□□□□ -2.31
PEP8YJL053W LST8P41318 303 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms