RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YCR085WP25650 117 aa1.26□□□□□ -2.21
RTT101YJL047C NRG2P38082 220 aa1.26□□□□□ -2.21
RTT101YJL047C GCV3P39726 170 aaPredicted RBP1.26□□□□□ -2.21
RTT101YJL047C POR2P40478 281 aa1.26□□□□□ -2.21
RTT101YJL047C LST8P41318 303 aa1.26□□□□□ -2.21
RTT101YJL047C YFL065CP43539 102 aa1.26□□□□□ -2.21
RTT101YJL047C ICY1Q04329 127 aa1.26□□□□□ -2.21
RTT101YJL047C PRM3Q08931 133 aa1.26□□□□□ -2.21
RTT101YJL047C YPR203WQ08994 102 aa1.26□□□□□ -2.21
RTT101YJL047C YLR363W-AQ3E747 85 aa1.26□□□□□ -2.21
RTT101YJL047C SUS1Q6WNK7 96 aa1.26□□□□□ -2.21
RTT101YJL047C ECM29P38737 1868 aa1.26□□□□□ -2.21
RTT101YJL047C NUP159P40477 1460 aa1.25□□□□□ -2.21
RTT101YJL047C YHL005CP38752 130 aa1.25□□□□□ -2.21
RTT101YJL047C IMP2P46972 177 aa1.25□□□□□ -2.21
RTT101YJL047C SED1Q01589 338 aa1.25□□□□□ -2.21
RTT101YJL047C YDL012CQ12489 107 aa1.25□□□□□ -2.21
RTT101YJL047C YLR285C-AQ3E771 56 aa1.25□□□□□ -2.21
RTT101YJL047C DOP1Q03921 1698 aa1.25□□□□□ -2.21
RTT101YJL047C ROX3P25046 220 aa1.25□□□□□ -2.21
RTT101YJL047C YCL042WP25572 119 aa1.25□□□□□ -2.21
RTT101YJL047C LSM2P38203 95 aaKnown RBP1.25□□□□□ -2.21
RTT101YJL047C RSM18P40033 138 aa1.25□□□□□ -2.21
RTT101YJL047C RPA12P32529 125 aaKnown RBP1.24□□□□□ -2.21
RTT101YJL047C YMR122CQ03879 124 aa1.24□□□□□ -2.21
RTT101YJL047C VAM10Q08474 114 aa1.24□□□□□ -2.21
RTT101YJL047C ENV10Q99382 181 aa1.24□□□□□ -2.21
RTT101YJL047C RPL33AP05744 107 aaKnown RBP1.24□□□□□ -2.21
RTT101YJL047C YLR162WQ06235 118 aa1.24□□□□□ -2.21
RTT101YJL047C YHR086W-AQ3E746 53 aa1.24□□□□□ -2.21
RTT101YJL047C YHR213W-AQ8TGT4 77 aa1.24□□□□□ -2.21
RTT101YJL047C TCB3Q03640 1545 aaKnown RBP1.24□□□□□ -2.21
RTT101YJL047C TY1B-JR2P47100 1755 aaKnown RBP1.24□□□□□ -2.21
RTT101YJL047C TY1B-ER2Q03619 1755 aa1.24□□□□□ -2.21
RTT101YJL047C TY1B-MR1Q04214 1755 aa1.24□□□□□ -2.21
RTT101YJL047C TY1B-MR2Q04670 1755 aaKnown RBP1.24□□□□□ -2.21
RTT101YJL047C TY1B-LR1Q12088 1755 aaKnown RBP1.24□□□□□ -2.21
RTT101YJL047C TY1B-NL1Q12112 1755 aa1.24□□□□□ -2.21
RTT101YJL047C TY1B-GR1Q12141 1755 aa1.24□□□□□ -2.21
RTT101YJL047C TY1B-BLQ12490 1755 aa1.24□□□□□ -2.21
RTT101YJL047C TY4B-JP47024 1803 aa1.23□□□□□ -2.21
RTT101YJL047C SIN3P22579 1536 aa1.23□□□□□ -2.21
RTT101YJL047C YBR219CP38317 127 aa1.23□□□□□ -2.21
RTT101YJL047C ICS3P47034 131 aa1.23□□□□□ -2.21
RTT101YJL047C PRM7Q12459 698 aa1.23□□□□□ -2.21
RTT101YJL047C RPS22BQ3E7Y3 130 aaKnown RBP1.23□□□□□ -2.21
RTT101YJL047C STT4P37297 1900 aa1.23□□□□□ -2.21
RTT101YJL047C YRF1-1P0CX20 1796 aa1.23□□□□□ -2.21
RTT101YJL047C YRF1-5P0CX21 1796 aa1.23□□□□□ -2.21
RTT101YJL047C YRF1-8P0CX22 1796 aa1.23□□□□□ -2.21
RTT101YJL047C YIL163CP40448 117 aa1.23□□□□□ -2.21
RTT101YJL047C COA3Q3E7B2 85 aa1.23□□□□□ -2.21
RTT101YJL047C URB1P34241 1764 aaKnown RBP1.23□□□□□ -2.21
RTT101YJL047C XRN1P22147 1528 aaKnown RBP1.22□□□□□ -2.21
RTT101YJL047C RPL22AP05749 121 aaKnown RBP1.22□□□□□ -2.21
RTT101YJL047C YBR013CP38215 129 aa1.22□□□□□ -2.21
RTT101YJL047C COA4Q05809 96 aa1.22□□□□□ -2.21
RTT101YJL047C TY1B-DR4Q07793 1604 aa1.22□□□□□ -2.21
RTT101YJL047C SCC2Q04002 1493 aa1.22□□□□□ -2.21
RTT101YJL047C YPR096CO13587 100 aa1.22□□□□□ -2.21
RTT101YJL047C PFY1P07274 126 aa1.22□□□□□ -2.21
RTT101YJL047C YSF3P0C074 85 aaPredicted RBP1.22□□□□□ -2.21
RTT101YJL047C YMR321CQ04898 105 aa1.22□□□□□ -2.21
RTT101YJL047C LSM6Q06406 86 aaKnown RBP1.22□□□□□ -2.21
RTT101YJL047C YCR095W-AQ3E787 52 aa1.22□□□□□ -2.21
RTT101YJL047C RRP5Q05022 1729 aaKnown RBP1.21□□□□□ -2.22
RTT101YJL047C NHP2P32495 156 aaPredicted RBP1.21□□□□□ -2.22
RTT101YJL047C MRPL38P35996 138 aaPredicted RBP1.21□□□□□ -2.22
RTT101YJL047C CCW12Q12127 133 aa1.21□□□□□ -2.22
RTT101YJL047C ACC1Q00955 2233 aaKnown RBP1.21□□□□□ -2.22
RTT101YJL047C MRPS12P53732 153 aa1.21□□□□□ -2.22
RTT101YJL047C YDR119W-AQ2V2P9 66 aa1.21□□□□□ -2.22
RTT101YJL047C PAU6P0CE90 120 aa1.2□□□□□ -2.22
RTT101YJL047C PAU18P0CE91 120 aa1.2□□□□□ -2.22
RTT101YJL047C YHL037CP38733 133 aa1.2□□□□□ -2.22
RTT101YJL047C SPC1P46965 94 aa1.2□□□□□ -2.22
RTT101YJL047C VPS55P47111 140 aa1.2□□□□□ -2.22
RTT101YJL047C YOL118CQ08259 102 aa1.2□□□□□ -2.22
RTT101YJL047C YPR145C-AQ2V2P0 78 aa1.2□□□□□ -2.22
RTT101YJL047C YNL146C-AQ3E7Z1 64 aa1.2□□□□□ -2.22
RTT101YJL047C DNF1P32660 1571 aa1.2□□□□□ -2.22
RTT101YJL047C FKS3Q04952 1785 aa1.2□□□□□ -2.22
RTT101YJL047C MRP17P28778 131 aa1.2□□□□□ -2.22
RTT101YJL047C MMS22Q06164 1454 aa1.2□□□□□ -2.22
RTT101YJL047C NTE1Q04958 1679 aa1.2□□□□□ -2.22
RTT101YJL047C UTP10P42945 1769 aaKnown RBP1.19□□□□□ -2.22
RTT101YJL047C TOM6P33448 61 aa1.19□□□□□ -2.22
RTT101YJL047C YBL071CP38185 102 aa1.19□□□□□ -2.22
RTT101YJL047C YDR210WQ03482 75 aa1.19□□□□□ -2.22
RTT101YJL047C PAI3P01094 68 aa1.19□□□□□ -2.22
RTT101YJL047C LCL2Q08045 131 aa1.19□□□□□ -2.22
RTT101YJL047C TY4B-HP0C2J7 1802 aa1.19□□□□□ -2.22
RTT101YJL047C CCW14O13547 238 aa1.18□□□□□ -2.22
RTT101YJL047C YFR010W-AP0C5N0 62 aa1.18□□□□□ -2.22
RTT101YJL047C GIS2P53849 153 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
RTT101YJL047C YCL048W-AQ2V2Q2 79 aa1.18□□□□□ -2.22
RTT101YJL047C PMD1P32634 1753 aa1.18□□□□□ -2.22
RTT101YJL047C YDR381C-AQ3E6R5 114 aa1.18□□□□□ -2.22
RTT101YJL047C MHF2Q3E829 80 aa1.18□□□□□ -2.22
RTT101YJL047C YHR214C-DP0CX93 97 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms