RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W DAD2P36162 133 aa5.68□□□□□ -1.5
CPD1YGR247W EOS1P53938 366 aa5.68□□□□□ -1.5
CPD1YGR247W ATP14Q12349 124 aa5.68□□□□□ -1.5
CPD1YGR247W YOR008C-AQ3E7B9 74 aa5.68□□□□□ -1.5
CPD1YGR247W TY1A-LR4P0C2I8 440 aaKnown RBP5.67□□□□□ -1.5
CPD1YGR247W TY1A-DR6P0CX70 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-ER1P0CX71 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-LR2P0CX72 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-PLP0CX73 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-JR1P0CX74 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-LR3P0CX75 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-ML2P0CX76 440 aa5.67□□□□□ -1.5
CPD1YGR247W MGR2Q02889 113 aa5.67□□□□□ -1.5
CPD1YGR247W YMR295CQ03559 197 aa5.67□□□□□ -1.5
CPD1YGR247W YDL241WQ07738 123 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-GR1Q12085 440 aa5.67□□□□□ -1.5
CPD1YGR247W YOP1Q12402 180 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-DR3Q12441 440 aa5.67□□□□□ -1.5
CPD1YGR247W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.67□□□□□ -1.5
CPD1YGR247W YAL065CO13511 128 aa5.66□□□□□ -1.5
CPD1YGR247W APS1P35181 156 aa5.66□□□□□ -1.5
CPD1YGR247W RPF1P38805 295 aaKnown RBP5.66□□□□□ -1.5
CPD1YGR247W WIP1Q2V2P8 89 aa5.66□□□□□ -1.5
CPD1YGR247W NTF2P33331 125 aaKnown RBP5.65□□□□□ -1.5
CPD1YGR247W URM1P40554 99 aaPredicted RBP5.65□□□□□ -1.5
CPD1YGR247W CWP2P43497 92 aa5.65□□□□□ -1.5
CPD1YGR247W TOS6P48560 102 aa5.65□□□□□ -1.5
CPD1YGR247W PKR1Q03880 122 aaKnown RBP5.65□□□□□ -1.5
CPD1YGR247W YGL149WP53116 101 aa5.64□□□□□ -1.51
CPD1YGR247W YLR415CO13578 112 aa5.63□□□□□ -1.51
CPD1YGR247W ADH3P07246 375 aaKnown RBP5.63□□□□□ -1.51
CPD1YGR247W AQY1P0CD91 305 aa5.63□□□□□ -1.51
CPD1YGR247W PAU19P0CE85 124 aa5.63□□□□□ -1.51
CPD1YGR247W PAU21P0CE86 164 aa5.63□□□□□ -1.51
CPD1YGR247W PAU22P0CE87 164 aa5.63□□□□□ -1.51
CPD1YGR247W PAU3P25610 124 aa5.63□□□□□ -1.51
CPD1YGR247W ARO2P28777 376 aaKnown RBP5.63□□□□□ -1.51
CPD1YGR247W PAU15P40585 124 aa5.63□□□□□ -1.51
CPD1YGR247W TPT1Q12272 230 aaKnown RBP5.63□□□□□ -1.51
CPD1YGR247W YPR014CQ6B0W2 109 aa5.63□□□□□ -1.51
CPD1YGR247W POR1P04840 283 aaKnown RBP5.61□□□□□ -1.51
CPD1YGR247W AQY2P0CD90 149 aa5.61□□□□□ -1.51
CPD1YGR247W PRE1P22141 198 aaKnown RBP5.61□□□□□ -1.51
CPD1YGR247W PCL2P25693 308 aa5.6□□□□□ -1.51
CPD1YGR247W SEC4P07560 215 aaKnown RBP5.59□□□□□ -1.51
CPD1YGR247W YIL014C-AQ02598 104 aa5.59□□□□□ -1.51
CPD1YGR247W RPS22BQ3E7Y3 130 aaKnown RBP5.59□□□□□ -1.51
CPD1YGR247W Q0032Q9ZZX7 96 aa5.59□□□□□ -1.51
CPD1YGR247W YFL019CP43576 117 aa5.58□□□□□ -1.52
CPD1YGR247W MED7Q08278 222 aa5.58□□□□□ -1.52
CPD1YGR247W STF1P01098 86 aa5.57□□□□□ -1.52
CPD1YGR247W CDC43P18898 376 aa5.57□□□□□ -1.52
CPD1YGR247W YCR024C-BQ3E7Z8 88 aa5.57□□□□□ -1.52
CPD1YGR247W YLR156WP0CE96 114 aa5.56□□□□□ -1.52
CPD1YGR247W YLR159WP0CE97 114 aa5.56□□□□□ -1.52
CPD1YGR247W YLR161WP0CE98 114 aa5.56□□□□□ -1.52
CPD1YGR247W CNB1P25296 175 aa5.56□□□□□ -1.52
CPD1YGR247W OXA1P39952 402 aa5.56□□□□□ -1.52
CPD1YGR247W SMD1Q02260 146 aaPredicted RBP5.56□□□□□ -1.52
CPD1YGR247W RPL31AP0C2H8 113 aaKnown RBP5.55□□□□□ -1.52
CPD1YGR247W HMRA2P0CY13 119 aa5.55□□□□□ -1.52
CPD1YGR247W PAU16P35994 123 aa5.54□□□□□ -1.52
CPD1YGR247W COX14P39103 70 aa5.54□□□□□ -1.52
CPD1YGR247W YGL193CP53097 103 aa5.54□□□□□ -1.52
CPD1YGR247W ERV14P53173 138 aa5.54□□□□□ -1.52
CPD1YGR247W YDR042CQ03205 200 aa5.54□□□□□ -1.52
CPD1YGR247W CMC2Q3E7A4 109 aa5.54□□□□□ -1.52
CPD1YGR247W VMA21P41806 77 aa5.53□□□□□ -1.52
CPD1YGR247W CMC4Q3E7A9 73 aa5.53□□□□□ -1.52
CPD1YGR247W ABF2Q02486 183 aa5.52□□□□□ -1.53
CPD1YGR247W COA3Q3E7B2 85 aa5.52□□□□□ -1.53
CPD1YGR247W YBL039W-BP0C268 59 aa5.51□□□□□ -1.53
CPD1YGR247W UBC4P15731 148 aa5.51□□□□□ -1.53
CPD1YGR247W TOA2P32774 122 aa5.51□□□□□ -1.53
CPD1YGR247W YOR268CQ08734 132 aa5.51□□□□□ -1.53
CPD1YGR247W PPT2Q12036 173 aa5.51□□□□□ -1.53
CPD1YGR247W ATP15P21306 62 aa5.5□□□□□ -1.53
CPD1YGR247W MVB12P42939 101 aa5.5□□□□□ -1.53
CPD1YGR247W KNH1P50112 268 aa5.5□□□□□ -1.53
CPD1YGR247W ATG8P38182 117 aaRIP-Chip data5.49□□□□□ -1.53not detected
CPD1YGR247W KTI11Q3E840 82 aa5.49□□□□□ -1.53
CPD1YGR247W IGD1P43598 195 aa5.48□□□□□ -1.53
CPD1YGR247W SHU1P38751 150 aa5.47□□□□□ -1.53
CPD1YGR247W YGL118CP53132 145 aa5.46□□□□□ -1.54
CPD1YGR247W YLR112WQ12130 139 aa5.46□□□□□ -1.54
CPD1YGR247W EDC2P40023 145 aaPredicted RBP5.45□□□□□ -1.54
CPD1YGR247W YER039C-AP0CD97 72 aa5.44□□□□□ -1.54
CPD1YGR247W CPR1P14832 162 aaKnown RBP5.44□□□□□ -1.54
CPD1YGR247W GSP1P32835 219 aaKnown RBP5.44□□□□□ -1.54
CPD1YGR247W HTL1Q9URQ5 78 aa5.44□□□□□ -1.54
CPD1YGR247W ATP16Q12165 160 aa5.43□□□□□ -1.54
CPD1YGR247W TY1A-OLQ92392 440 aaKnown RBP5.43□□□□□ -1.54
CPD1YGR247W ADH1P00330 348 aaKnown RBP5.42□□□□□ -1.54
CPD1YGR247W SCM4P32564 187 aa5.42□□□□□ -1.54
CPD1YGR247W MET32Q12041 191 aa5.42□□□□□ -1.54
CPD1YGR247W MBF1O14467 151 aaKnown RBP5.41□□□□□ -1.54
CPD1YGR247W SPG1P50088 95 aa5.41□□□□□ -1.54
CPD1YGR247W RPL27BP0C2H7 136 aaKnown RBP5.4□□□□□ -1.54
CPD1YGR247W YKL023C-AQ2V2P3 75 aa5.4□□□□□ -1.54
CPD1YGR247W PEX17P40155 199 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms