RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W YIA6P40556 373 aa3.95□□□□□ -1.78
CDC4YFL009W RPL15BP54780 204 aaPredicted RBP3.95□□□□□ -1.78
CDC4YFL009W IRC23Q08416 157 aa3.95□□□□□ -1.78
CDC4YFL009W CCW14O13547 238 aa3.95□□□□□ -1.78
CDC4YFL009W RPS14AP06367 137 aaKnown RBP3.95□□□□□ -1.78
CDC4YFL009W YDL022C-AP0C5L6 82 aa3.95□□□□□ -1.78
CDC4YFL009W YCR022CP25620 114 aa3.95□□□□□ -1.78
CDC4YFL009W KTI12P34253 313 aaKnown RBP3.95□□□□□ -1.78
CDC4YFL009W DSE2P38844 325 aa3.95□□□□□ -1.78
CDC4YFL009W RPS14BP39516 138 aaKnown RBP3.95□□□□□ -1.78
CDC4YFL009W YIL086CP40503 102 aa3.95□□□□□ -1.78
CDC4YFL009W ECO1P43605 281 aa3.95□□□□□ -1.78
CDC4YFL009W PGU1P47180 361 aa3.95□□□□□ -1.78
CDC4YFL009W YLR194CQ05777 254 aa3.95□□□□□ -1.78
CDC4YFL009W YMR175W-AQ3E766 64 aa3.95□□□□□ -1.78
CDC4YFL009W YNL277W-AQ3E7Z0 62 aa3.95□□□□□ -1.78
CDC4YFL009W YNL194CP40169 301 aa3.94□□□□□ -1.78
CDC4YFL009W SIM1P40472 476 aa3.94□□□□□ -1.78
CDC4YFL009W YLR042CQ07990 161 aa3.94□□□□□ -1.78
CDC4YFL009W YLR342W-AQ3E810 57 aa3.94□□□□□ -1.78
CDC4YFL009W LDB16P25587 256 aa3.94□□□□□ -1.78
CDC4YFL009W AIM19P40502 157 aa3.94□□□□□ -1.78
CDC4YFL009W YGR018CP53211 109 aa3.94□□□□□ -1.78
CDC4YFL009W YDR114CQ04597 100 aa3.94□□□□□ -1.78
CDC4YFL009W KSH1Q8TGJ3 72 aa3.94□□□□□ -1.78
CDC4YFL009W YSY6P38374 65 aa3.93□□□□□ -1.78
CDC4YFL009W RRT13P40042 185 aa3.93□□□□□ -1.78
CDC4YFL009W ATP23P53722 227 aa3.93□□□□□ -1.78
CDC4YFL009W YNL046WP53956 172 aa3.93□□□□□ -1.78
CDC4YFL009W RPL42AP0CX27 106 aaKnown RBP3.93□□□□□ -1.78
CDC4YFL009W RPL42BP0CX28 106 aaKnown RBP3.93□□□□□ -1.78
CDC4YFL009W YBL071CP38185 102 aa3.93□□□□□ -1.78
CDC4YFL009W RSM19P53733 91 aaPredicted RBP3.93□□□□□ -1.78
CDC4YFL009W EMC6Q12431 108 aa3.93□□□□□ -1.78
CDC4YFL009W HMRA2P0CY13 119 aa3.92□□□□□ -1.78
CDC4YFL009W AGA1P32323 725 aa3.92□□□□□ -1.78
CDC4YFL009W MBB1P39534 108 aa3.92□□□□□ -1.78
CDC4YFL009W VHS2P40463 436 aa3.92□□□□□ -1.78
CDC4YFL009W UBC4P15731 148 aa3.92□□□□□ -1.78
CDC4YFL009W ADH5P38113 351 aaKnown RBP3.92□□□□□ -1.78
CDC4YFL009W CTR2P38865 189 aa3.92□□□□□ -1.78
CDC4YFL009W VTC1P40046 129 aaRIP-Chip data3.92□□□□□ -1.78not detected
CDC4YFL009W SWS2P53937 143 aa3.92□□□□□ -1.78
CDC4YFL009W HAL1Q01766 294 aa3.92□□□□□ -1.78
CDC4YFL009W YER145C-AA0A023PYF4 145 aa3.91□□□□□ -1.78
CDC4YFL009W RPL18AP0CX49 186 aaKnown RBP3.91□□□□□ -1.78
CDC4YFL009W RPL18BP0CX50 186 aaKnown RBP3.91□□□□□ -1.78
CDC4YFL009W RPL16BP26785 198 aaKnown RBP3.91□□□□□ -1.78
CDC4YFL009W DCV1P43595 202 aa3.91□□□□□ -1.78
CDC4YFL009W YMR320WQ04897 101 aa3.91□□□□□ -1.78
CDC4YFL009W YOR029WQ12243 111 aa3.91□□□□□ -1.78
CDC4YFL009W YIL046W-AQ3E7Z4 54 aa3.91□□□□□ -1.78
CDC4YFL009W IES6P32617 166 aa3.9□□□□□ -1.78
CDC4YFL009W MPC2P38857 129 aa3.9□□□□□ -1.78
CDC4YFL009W YER187WP40102 141 aa3.9□□□□□ -1.78
CDC4YFL009W RRS1Q08746 203 aaKnown RBP3.9□□□□□ -1.78
CDC4YFL009W FAB1P34756 2278 aa3.9□□□□□ -1.78
CDC4YFL009W IRA2P19158 3079 aa3.9□□□□□ -1.79
CDC4YFL009W MSA2P36157 363 aa3.9□□□□□ -1.79
CDC4YFL009W SFT1P43682 97 aa3.9□□□□□ -1.79
CDC4YFL009W YKL183C-AQ3E765 70 aa3.9□□□□□ -1.79
CDC4YFL009W BET1P22804 142 aa3.89□□□□□ -1.79
CDC4YFL009W MTC6P38849 526 aa3.89□□□□□ -1.79
CDC4YFL009W PBA1Q05778 276 aa3.89□□□□□ -1.79
CDC4YFL009W YKL097CP34245 136 aa3.89□□□□□ -1.79
CDC4YFL009W YER084WP40057 128 aa3.89□□□□□ -1.79
CDC4YFL009W YDR209CQ03480 137 aa3.89□□□□□ -1.79
CDC4YFL009W YMR181CQ03231 154 aa3.88□□□□□ -1.79
CDC4YFL009W YDL009CQ12210 107 aa3.88□□□□□ -1.79
CDC4YFL009W YOR008C-AQ3E7B9 74 aa3.88□□□□□ -1.79
CDC4YFL009W YHR213WP0CI67 198 aa3.88□□□□□ -1.79
CDC4YFL009W YGR219WP53307 113 aa3.88□□□□□ -1.79
CDC4YFL009W PEX17P40155 199 aa3.87□□□□□ -1.79
CDC4YFL009W MMS2P53152 137 aa3.87□□□□□ -1.79
CDC4YFL009W PRM7Q12459 698 aa3.87□□□□□ -1.79
CDC4YFL009W PIR5P46999 287 aa3.87□□□□□ -1.79
CDC4YFL009W YBR144CP34215 104 aa3.86□□□□□ -1.79
CDC4YFL009W YKR045CP36138 183 aa3.86□□□□□ -1.79
CDC4YFL009W YHR022CP38763 256 aa3.86□□□□□ -1.79
CDC4YFL009W IMP2P46972 177 aa3.86□□□□□ -1.79
CDC4YFL009W MRPS12P53732 153 aa3.86□□□□□ -1.79
CDC4YFL009W PPT2Q12036 173 aa3.86□□□□□ -1.79
CDC4YFL009W RNH203Q12338 110 aa3.86□□□□□ -1.79
CDC4YFL009W YRA2P36036 203 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
CDC4YFL009W YLR281CQ05863 155 aa3.86□□□□□ -1.79
CDC4YFL009W HUR1P45820 110 aa3.85□□□□□ -1.79
CDC4YFL009W YDR246W-AQ3E763 66 aa3.85□□□□□ -1.79
CDC4YFL009W SEN1Q00416 2231 aaKnown RBP3.85□□□□□ -1.79
CDC4YFL009W GAT3Q07928 141 aa3.84□□□□□ -1.79
CDC4YFL009W MRPL39P36533 70 aa3.84□□□□□ -1.79
CDC4YFL009W RRT1P38192 103 aa3.84□□□□□ -1.79
CDC4YFL009W YNL190WP53872 204 aa3.84□□□□□ -1.79
CDC4YFL009W ATP15P21306 62 aa3.83□□□□□ -1.8
CDC4YFL009W YML122CQ03207 126 aa3.83□□□□□ -1.8
CDC4YFL009W RPL28P02406 149 aaKnown RBP3.83□□□□□ -1.8
CDC4YFL009W QCR8P08525 94 aa3.83□□□□□ -1.8
CDC4YFL009W HOT13P36078 116 aa3.83□□□□□ -1.8
CDC4YFL009W YAR029WP39549 74 aa3.83□□□□□ -1.8
CDC4YFL009W SIP18P50263 79 aa3.83□□□□□ -1.8
CDC4YFL009W YMR105W-AQ8TGS8 64 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms