RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C FIT2Q08906 153 aa5.64□□□□□ -1.51
CDC13YDL220C NAG1Q8TGN9 163 aa5.64□□□□□ -1.51
CDC13YDL220C RSM19P53733 91 aaPredicted RBP5.63□□□□□ -1.51
CDC13YDL220C ICY1Q04329 127 aa5.63□□□□□ -1.51
CDC13YDL220C YMR141CP40211 102 aa5.63□□□□□ -1.51
CDC13YDL220C PIR5P46999 287 aa5.63□□□□□ -1.51
CDC13YDL220C SUT1P53032 299 aaKnown RBP5.63□□□□□ -1.51
CDC13YDL220C PRM7Q12459 698 aa5.63□□□□□ -1.51
CDC13YDL220C YBR126W-AQ8TGU7 68 aa5.63□□□□□ -1.51
CDC13YDL220C MED6P38782 295 aa5.62□□□□□ -1.51
CDC13YDL220C RPL16AP26784 199 aaKnown RBP5.62□□□□□ -1.51
CDC13YDL220C YOR343CQ12484 108 aa5.62□□□□□ -1.51
CDC13YDL220C YHR213WP0CI67 198 aa5.61□□□□□ -1.51
CDC13YDL220C YNL234WP53857 426 aa5.61□□□□□ -1.51
CDC13YDL220C SMD1Q02260 146 aaPredicted RBP5.61□□□□□ -1.51
CDC13YDL220C SPT4P32914 102 aaPredicted RBP5.61□□□□□ -1.51
CDC13YDL220C ECO1P43605 281 aa5.61□□□□□ -1.51
CDC13YDL220C YNL190WP53872 204 aa5.61□□□□□ -1.51
CDC13YDL220C DAD4P69851 72 aa5.61□□□□□ -1.51
CDC13YDL220C YML122CQ03207 126 aa5.61□□□□□ -1.51
CDC13YDL220C YDR246W-AQ3E763 66 aa5.61□□□□□ -1.51
CDC13YDL220C UBC13P52490 153 aa5.6□□□□□ -1.51
CDC13YDL220C PBP4Q07362 185 aaKnown RBP5.6□□□□□ -1.51
CDC13YDL220C SPO24Q3E752 67 aa5.6□□□□□ -1.51
CDC13YDL220C AGA1P32323 725 aa5.59□□□□□ -1.52
CDC13YDL220C YLR111WQ12528 110 aa5.59□□□□□ -1.52
CDC13YDL220C BPH1P25356 2167 aa5.59□□□□□ -1.52
CDC13YDL220C ICS3P47034 131 aa5.58□□□□□ -1.52
CDC13YDL220C YLR285C-AQ3E771 56 aa5.58□□□□□ -1.52
CDC13YDL220C COA3Q3E7B2 85 aa5.58□□□□□ -1.52
CDC13YDL220C ERI1P62651 68 aaKnown RBP5.58□□□□□ -1.52
CDC13YDL220C PPT2Q12036 173 aa5.58□□□□□ -1.52
CDC13YDL220C TOM1Q03280 3268 aa5.57□□□□□ -1.52
CDC13YDL220C YLR194CQ05777 254 aa5.57□□□□□ -1.52
CDC13YDL220C MTC6P38849 526 aa5.57□□□□□ -1.52
CDC13YDL220C RPC11Q04307 110 aaPredicted RBP5.57□□□□□ -1.52
CDC13YDL220C FHN1P53279 174 aa5.56□□□□□ -1.52
CDC13YDL220C MGR2Q02889 113 aa5.56□□□□□ -1.52
CDC13YDL220C YMR181CQ03231 154 aa5.56□□□□□ -1.52
CDC13YDL220C TVP23P38962 199 aa5.55□□□□□ -1.52
CDC13YDL220C GLO1P50107 326 aa5.55□□□□□ -1.52
CDC13YDL220C EDC1P53080 175 aaPredicted RBP5.55□□□□□ -1.52
CDC13YDL220C YMR295CQ03559 197 aa5.55□□□□□ -1.52
CDC13YDL220C SPS100P13130 326 aa5.55□□□□□ -1.52
CDC13YDL220C AIM4P38305 123 aaPredicted RBP5.55□□□□□ -1.52
CDC13YDL220C MPC2P38857 129 aa5.54□□□□□ -1.52
CDC13YDL220C NCE101Q02820 53 aa5.54□□□□□ -1.52
CDC13YDL220C YHR214C-DP0CX93 97 aa5.54□□□□□ -1.52
CDC13YDL220C TOS8P53147 276 aa5.54□□□□□ -1.52
CDC13YDL220C YDR274CP87283 123 aa5.54□□□□□ -1.52
CDC13YDL220C VPS68Q12016 184 aa5.54□□□□□ -1.52
CDC13YDL220C YLR156WP0CE96 114 aa5.53□□□□□ -1.52
CDC13YDL220C YLR159WP0CE97 114 aa5.53□□□□□ -1.52
CDC13YDL220C YLR161WP0CE98 114 aa5.53□□□□□ -1.52
CDC13YDL220C PGU1P47180 361 aa5.53□□□□□ -1.52
CDC13YDL220C LDB16P25587 256 aa5.52□□□□□ -1.53
CDC13YDL220C YHR214C-EQ8TGK0 99 aa5.52□□□□□ -1.53
CDC13YDL220C FAS1P07149 2051 aaKnown RBP5.52□□□□□ -1.53
CDC13YDL220C RPS14BP39516 138 aaKnown RBP5.52□□□□□ -1.53
CDC13YDL220C PEX17P40155 199 aa5.52□□□□□ -1.53
CDC13YDL220C DCV1P43595 202 aa5.52□□□□□ -1.53
CDC13YDL220C NCE102Q12207 173 aaRIP-Chip data5.52□□□□□ -1.53not detected
CDC13YDL220C YOR381W-AQ3E804 55 aa5.52□□□□□ -1.53
CDC13YDL220C ATP15P21306 62 aa5.51□□□□□ -1.53
CDC13YDL220C RPB9P27999 122 aa5.51□□□□□ -1.53
CDC13YDL220C YGL258W-AQ3E740 77 aa5.51□□□□□ -1.53
CDC13YDL220C SEC16P48415 2195 aaKnown RBP5.51□□□□□ -1.53
CDC13YDL220C ACC1Q00955 2233 aaKnown RBP5.51□□□□□ -1.53
CDC13YDL220C YKR045CP36138 183 aa5.5□□□□□ -1.53
CDC13YDL220C RSM18P40033 138 aa5.5□□□□□ -1.53
CDC13YDL220C ATP20Q12233 115 aa5.5□□□□□ -1.53
CDC13YDL220C RPL26AP05743 127 aaKnown RBP5.5□□□□□ -1.53
CDC13YDL220C YIL029CP40538 142 aa5.5□□□□□ -1.53
CDC13YDL220C YFR035CP43608 114 aa5.5□□□□□ -1.53
CDC13YDL220C BRR2P32639 2163 aaKnown RBP5.5□□□□□ -1.53
CDC13YDL220C YHR022CP38763 256 aa5.5□□□□□ -1.53
CDC13YDL220C CTR2P38865 189 aa5.5□□□□□ -1.53
CDC13YDL220C IRC19Q07843 230 aa5.5□□□□□ -1.53
CDC13YDL220C HUR1P45820 110 aa5.49□□□□□ -1.53
CDC13YDL220C SPI1P40092 148 aa5.48□□□□□ -1.53
CDC13YDL220C MSA2P36157 363 aa5.48□□□□□ -1.53
CDC13YDL220C IMP2P46972 177 aa5.48□□□□□ -1.53
CDC13YDL220C TOS6P48560 102 aa5.48□□□□□ -1.53
CDC13YDL220C YOR034C-AQ3E735 80 aa5.48□□□□□ -1.53
CDC13YDL220C KRE9P39005 276 aa5.47□□□□□ -1.53
CDC13YDL220C MIG3P39943 394 aa5.47□□□□□ -1.53
CDC13YDL220C MRPS12P53732 153 aa5.47□□□□□ -1.53
CDC13YDL220C YMR254CQ04838 102 aa5.47□□□□□ -1.53
CDC13YDL220C RPL15AP05748 204 aaKnown RBP5.46□□□□□ -1.54
CDC13YDL220C YCR022CP25620 114 aa5.46□□□□□ -1.54
CDC13YDL220C RTG1P32607 177 aa5.45□□□□□ -1.54
CDC13YDL220C YEL045CP32616 141 aa5.45□□□□□ -1.54
CDC13YDL220C RPL26BP53221 127 aaKnown RBP5.45□□□□□ -1.54
CDC13YDL220C PCP1P53259 346 aa5.45□□□□□ -1.54
CDC13YDL220C YDL009CQ12210 107 aa5.45□□□□□ -1.54
CDC13YDL220C YGR121W-AQ3E816 71 aa5.45□□□□□ -1.54
CDC13YDL220C TDA2P40045 126 aa5.45□□□□□ -1.54
CDC13YDL220C YAL065CO13511 128 aa5.44□□□□□ -1.54
CDC13YDL220C YAL064W-BO13512 126 aa5.44□□□□□ -1.54
CDC13YDL220C MDM35O60200 86 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms