RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	KRE1	P17260	313 aa		4.27	□□□□□ -1.73
CMR1	YDL156W	YJR146W	P47174	117 aa		4.27	□□□□□ -1.73
CMR1	YDL156W	YPL067C	Q02754	198 aa		4.27	□□□□□ -1.73
CMR1	YDL156W	YMR082C	Q04276	118 aa		4.26	□□□□□ -1.73
CMR1	YDL156W	FIT2	Q08906	153 aa		4.26	□□□□□ -1.73
CMR1	YDL156W	YLR296W	Q05898	108 aa		4.25	□□□□□ -1.73
CMR1	YDL156W	RPL40A	P0CH08	128 aa	Known RBP	4.24	□□□□□ -1.73
CMR1	YDL156W	RPL40B	P0CH09	128 aa	Known RBP	4.24	□□□□□ -1.73
CMR1	YDL156W	YFL051C	P43552	160 aa		4.24	□□□□□ -1.73
CMR1	YDL156W	SEN15	Q04675	128 aa		4.24	□□□□□ -1.73
CMR1	YDL156W	OST5	Q92316	86 aa		4.24	□□□□□ -1.73
CMR1	YDL156W	PAU12	P53343	120 aa		4.23	□□□□□ -1.73
CMR1	YDL156W	MET31	Q03081	177 aa		4.23	□□□□□ -1.73
CMR1	YDL156W	GPI11	Q06636	219 aa		4.23	□□□□□ -1.73
CMR1	YDL156W	UTR5	P32630	166 aa		4.22	□□□□□ -1.73
CMR1	YDL156W	FMT1	P32785	401 aa		4.22	□□□□□ -1.73
CMR1	YDL156W	YEL014C	P39999	101 aa		4.22	□□□□□ -1.73
CMR1	YDL156W	YJL144W	P47009	104 aa		4.22	□□□□□ -1.73
CMR1	YDL156W	CMC4	Q3E7A9	73 aa		4.22	□□□□□ -1.73
CMR1	YDL156W	YHR022C	P38763	256 aa		4.21	□□□□□ -1.74
CMR1	YDL156W	RSM19	P53733	91 aa	Predicted RBP	4.21	□□□□□ -1.74
CMR1	YDL156W	YRF1-1	P0CX20	1796 aa		4.2	□□□□□ -1.74
CMR1	YDL156W	YRF1-5	P0CX21	1796 aa		4.2	□□□□□ -1.74
CMR1	YDL156W	YRF1-8	P0CX22	1796 aa		4.2	□□□□□ -1.74
CMR1	YDL156W	PAU2	P32612	120 aa		4.2	□□□□□ -1.74
CMR1	YDL156W	RDS3	Q06835	107 aa	Predicted RBP	4.2	□□□□□ -1.74
CMR1	YDL156W	FAS2	P19097	1887 aa	Known RBP	4.2	□□□□□ -1.74
CMR1	YDL156W	YHR138C	P38841	114 aa	Predicted RBP	4.19	□□□□□ -1.74
CMR1	YDL156W	EMC6	Q12431	108 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	PCC1	Q3E833	88 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	SUS1	Q6WNK7	96 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.19	□□□□□ -1.74
CMR1	YDL156W	RPL36B	O14455	100 aa	Known RBP	4.19	□□□□□ -1.74
CMR1	YDL156W	RTC6	O14464	93 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	RPL36A	P05745	100 aa	Predicted RBP	4.19	□□□□□ -1.74
CMR1	YDL156W	HSP150	P32478	413 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	AGA2	P32781	87 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	ATG8	P38182	117 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
CMR1	YDL156W	SNN1	P48232	102 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	CYT2	Q00873	224 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	HRT1	Q08273	121 aa		4.19	□□□□□ -1.74
CMR1	YDL156W	RIF1	P29539	1916 aa		4.18	□□□□□ -1.74
CMR1	YDL156W	YKR045C	P36138	183 aa		4.18	□□□□□ -1.74
CMR1	YDL156W	MHF1	Q3E835	90 aa		4.18	□□□□□ -1.74
CMR1	YDL156W	SOD1	P00445	154 aa	Known RBP	4.17	□□□□□ -1.74
CMR1	YDL156W	PAU19	P0CE85	124 aa		4.17	□□□□□ -1.74
CMR1	YDL156W	PAU3	P25610	124 aa		4.17	□□□□□ -1.74
CMR1	YDL156W	CYB5	P40312	120 aa		4.17	□□□□□ -1.74
CMR1	YDL156W	YHR007C-A	Q07074	71 aa		4.17	□□□□□ -1.74
CMR1	YDL156W	NRG2	P38082	220 aa		4.16	□□□□□ -1.74
CMR1	YDL156W	PAU24	P38155	120 aa		4.16	□□□□□ -1.74
CMR1	YDL156W	YIL014C-A	Q02598	104 aa		4.16	□□□□□ -1.74
CMR1	YDL156W	HPA2	Q06592	156 aa		4.15	□□□□□ -1.74
CMR1	YDL156W	RRT15	Q3E811	62 aa		4.15	□□□□□ -1.74
CMR1	YDL156W	GSC2	P40989	1895 aa		4.15	□□□□□ -1.75
CMR1	YDL156W	YFR010W-A	P0C5N0	62 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	YJL197C-A	P0C5P0	93 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	RPB7	P34087	171 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	YLR363W-A	Q3E747	85 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	TY4B-H	P0C2J7	1802 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	TY4B-J	P47024	1803 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	AVO2	Q04749	426 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	YLR194C	Q05777	254 aa		4.14	□□□□□ -1.75
CMR1	YDL156W	SRX1	P36077	127 aa		4.13	□□□□□ -1.75
CMR1	YDL156W	SWM2	P40342	146 aa		4.13	□□□□□ -1.75
CMR1	YDL156W	CWP2	P43497	92 aa		4.13	□□□□□ -1.75
CMR1	YDL156W	DAN1	P47178	298 aa		4.13	□□□□□ -1.75
CMR1	YDL156W	YDR042C	Q03205	200 aa		4.12	□□□□□ -1.75
CMR1	YDL156W	SSS1	P35179	80 aa		4.11	□□□□□ -1.75
CMR1	YDL156W	PAU16	P35994	123 aa		4.11	□□□□□ -1.75
CMR1	YDL156W	DSE2	P38844	325 aa		4.11	□□□□□ -1.75
CMR1	YDL156W	YIR020C	P40575	100 aa		4.11	□□□□□ -1.75
CMR1	YDL156W	PAU15	P40585	124 aa		4.11	□□□□□ -1.75
CMR1	YDL156W	MYO1	P08964	1928 aa		4.11	□□□□□ -1.75
CMR1	YDL156W	QCR8	P08525	94 aa		4.1	□□□□□ -1.75
CMR1	YDL156W	COX23	P38824	151 aa		4.1	□□□□□ -1.75
CMR1	YDL156W	RGM1	Q00453	211 aa		4.1	□□□□□ -1.75
CMR1	YDL156W	YOL131W	Q08270	108 aa		4.1	□□□□□ -1.75
CMR1	YDL156W	MHF2	Q3E829	80 aa		4.1	□□□□□ -1.75
CMR1	YDL156W	FPR1	P20081	114 aa	Known RBP	4.09	□□□□□ -1.75
CMR1	YDL156W	YHL005C	P38752	130 aa		4.09	□□□□□ -1.75
CMR1	YDL156W	LSM2	P38203	95 aa	Known RBP	4.08	□□□□□ -1.76
CMR1	YDL156W	GCV3	P39726	170 aa	Predicted RBP	4.07	□□□□□ -1.76
CMR1	YDL156W	FKS3	Q04952	1785 aa		4.06	□□□□□ -1.76
CMR1	YDL156W	YHR213W	P0CI67	198 aa		4.06	□□□□□ -1.76
CMR1	YDL156W	RSM18	P40033	138 aa		4.06	□□□□□ -1.76
CMR1	YDL156W	YCR085W	P25650	117 aa		4.06	□□□□□ -1.76
CMR1	YDL156W	VMA9	Q3E7B6	73 aa		4.06	□□□□□ -1.76
CMR1	YDL156W	YFL065C	P43539	102 aa		4.05	□□□□□ -1.76
CMR1	YDL156W	YPR203W	Q08994	102 aa		4.05	□□□□□ -1.76
CMR1	YDL156W	ENV10	Q99382	181 aa		4.05	□□□□□ -1.76
CMR1	YDL156W	YBR013C	P38215	129 aa		4.04	□□□□□ -1.76
CMR1	YDL156W	YBR027C	P38220	110 aa		4.03	□□□□□ -1.76
CMR1	YDL156W	YPR145C-A	Q2V2P0	78 aa		4.03	□□□□□ -1.76
CMR1	YDL156W	PFY1	P07274	126 aa		4.02	□□□□□ -1.77
CMR1	YDL156W	POR2	P40478	281 aa		4.02	□□□□□ -1.77
CMR1	YDL156W	YGL014C-A	P0C5N1	53 aa		4.02	□□□□□ -1.77
CMR1	YDL156W	HMRA2	P0CY13	119 aa		4.02	□□□□□ -1.77
CMR1	YDL156W	RPA12	P32529	125 aa	Known RBP	4.02	□□□□□ -1.77
CMR1	YDL156W	PAU5	P43575	122 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms