RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W ARL3Q02804 198 aa1.08□□□□□ -2.24
CDC53YDL132W PAU21P0CE86 164 aa1.08□□□□□ -2.24
CDC53YDL132W PAU22P0CE87 164 aa1.08□□□□□ -2.24
CDC53YDL132W SRL3P36167 246 aa1.08□□□□□ -2.24
CDC53YDL132W YFL051CP43552 160 aa1.08□□□□□ -2.24
CDC53YDL132W YCL001W-AP87012 153 aa1.08□□□□□ -2.24
CDC53YDL132W CDC39P25655 2108 aaKnown RBP1.08□□□□□ -2.24
CDC53YDL132W UGX2P32772 223 aa1.07□□□□□ -2.24
CDC53YDL132W SRX1P36077 127 aa1.07□□□□□ -2.24
CDC53YDL132W KTI11Q3E840 82 aa1.07□□□□□ -2.24
CDC53YDL132W ANB1P19211 157 aa1.07□□□□□ -2.24
CDC53YDL132W SAE3P89114 91 aa1.07□□□□□ -2.24
CDC53YDL132W LDB18Q07887 179 aa1.07□□□□□ -2.24
CDC53YDL132W YOR097CQ12274 175 aaPredicted RBP1.07□□□□□ -2.24
CDC53YDL132W NMT1P14743 455 aa1.06□□□□□ -2.24
CDC53YDL132W YBR027CP38220 110 aa1.06□□□□□ -2.24
CDC53YDL132W YGL230CP53074 147 aa1.06□□□□□ -2.24
CDC53YDL132W GTT2Q12390 233 aa1.06□□□□□ -2.24
CDC53YDL132W RTC6O14464 93 aa1.06□□□□□ -2.24
CDC53YDL132W YFL065CP43539 102 aa1.06□□□□□ -2.24
CDC53YDL132W YLR296WQ05898 108 aa1.06□□□□□ -2.24
CDC53YDL132W YIL046W-AQ3E7Z4 54 aa1.06□□□□□ -2.24
CDC53YDL132W STT4P37297 1900 aa1.05□□□□□ -2.24
CDC53YDL132W FUN14P18411 198 aa1.05□□□□□ -2.24
CDC53YDL132W YFR035CP43608 114 aa1.05□□□□□ -2.24
CDC53YDL132W YPL067CQ02754 198 aa1.05□□□□□ -2.24
CDC53YDL132W YOR304C-AO14468 76 aa1.05□□□□□ -2.24
CDC53YDL132W RPL33AP05744 107 aaKnown RBP1.05□□□□□ -2.24
CDC53YDL132W YJL197C-AP0C5P0 93 aa1.05□□□□□ -2.24
CDC53YDL132W YER039C-AP0CD97 72 aa1.05□□□□□ -2.24
CDC53YDL132W YCR099CP25657 155 aa1.05□□□□□ -2.24
CDC53YDL132W GSP1P32835 219 aaKnown RBP1.05□□□□□ -2.24
CDC53YDL132W MRPL15P36523 253 aa1.05□□□□□ -2.24
CDC53YDL132W YBR242WP38331 238 aa1.05□□□□□ -2.24
CDC53YDL132W YOR376W-AQ3E805 51 aa1.05□□□□□ -2.24
CDC53YDL132W YHR213WP0CI67 198 aa1.04□□□□□ -2.24
CDC53YDL132W RPB11P38902 120 aa1.04□□□□□ -2.24
CDC53YDL132W YGL014C-AP0C5N1 53 aa1.04□□□□□ -2.24
CDC53YDL132W HAP3P13434 144 aa1.04□□□□□ -2.24
CDC53YDL132W YKL044WP36092 106 aa1.04□□□□□ -2.24
CDC53YDL132W ERV14P53173 138 aa1.04□□□□□ -2.24
CDC53YDL132W BPH1P25356 2167 aa1.04□□□□□ -2.24
CDC53YDL132W SLH1P53327 1967 aaKnown RBP1.04□□□□□ -2.24
CDC53YDL132W URA2P07259 2214 aaKnown RBP1.03□□□□□ -2.24
CDC53YDL132W RPL22AP05749 121 aaKnown RBP1.03□□□□□ -2.24
CDC53YDL132W SEC59P20048 519 aa1.03□□□□□ -2.24
CDC53YDL132W YHL037CP38733 133 aa1.03□□□□□ -2.24
CDC53YDL132W LST8P41318 303 aa1.03□□□□□ -2.24
CDC53YDL132W YGR164WP53291 111 aa1.03□□□□□ -2.24
CDC53YDL132W RUB1Q03919 77 aa1.03□□□□□ -2.24
CDC53YDL132W OCA6Q12454 224 aa1.03□□□□□ -2.24
CDC53YDL132W MRPL11P36521 249 aaPredicted RBP1.03□□□□□ -2.25
CDC53YDL132W HSP10P38910 106 aa1.03□□□□□ -2.25
CDC53YDL132W YAR064WP39563 99 aa1.03□□□□□ -2.25
CDC53YDL132W GPI19Q04082 140 aa1.03□□□□□ -2.25
CDC53YDL132W SWC7Q06707 132 aa1.03□□□□□ -2.25
CDC53YDL132W PFY1P07274 126 aa1.02□□□□□ -2.25
CDC53YDL132W AQY2P0CD90 149 aa1.02□□□□□ -2.25
CDC53YDL132W AIM18P38884 321 aa1.02□□□□□ -2.25
CDC53YDL132W YGL149WP53116 101 aa1.02□□□□□ -2.25
CDC53YDL132W YNL122CP53921 115 aaPredicted RBP1.02□□□□□ -2.25
CDC53YDL132W EMP24P32803 203 aaKnown RBP1.01□□□□□ -2.25
CDC53YDL132W YMR122CQ03879 124 aa1.01□□□□□ -2.25
CDC53YDL132W FCF2Q12035 217 aaPredicted RBP1.01□□□□□ -2.25
CDC53YDL132W MDN1Q12019 4910 aaKnown RBP1.01□□□□□ -2.25
CDC53YDL132W RPL43AP0CX25 92 aaKnown RBP1.01□□□□□ -2.25
CDC53YDL132W RPL43BP0CX26 92 aa1.01□□□□□ -2.25
CDC53YDL132W YAR029WP39549 74 aa1.01□□□□□ -2.25
CDC53YDL132W RGI1P40043 161 aaPredicted RBP1.01□□□□□ -2.25
CDC53YDL132W YLR042CQ07990 161 aa1.01□□□□□ -2.25
CDC53YDL132W MHF1Q3E835 90 aa1.01□□□□□ -2.25
CDC53YDL132W BLM10P43583 2143 aa1.01□□□□□ -2.25
CDC53YDL132W YJL009WP47078 108 aa1□□□□□ -2.25
CDC53YDL132W YPR203WQ08994 102 aa1□□□□□ -2.25
CDC53YDL132W RTR2Q12378 196 aa1□□□□□ -2.25
CDC53YDL132W ADK1P07170 222 aaKnown RBP1□□□□□ -2.25
CDC53YDL132W YER137CP40083 148 aaKnown RBP1□□□□□ -2.25
CDC53YDL132W RPS12P48589 143 aaKnown RBP1□□□□□ -2.25
CDC53YDL132W VAR1P02381 398 aa0.99□□□□□ -2.25
CDC53YDL132W SNF11P38956 169 aa0.99□□□□□ -2.25
CDC53YDL132W YER187WP40102 141 aa0.99□□□□□ -2.25
CDC53YDL132W PAM16P42949 149 aa0.99□□□□□ -2.25
CDC53YDL132W IRC21Q04772 201 aa0.99□□□□□ -2.25
CDC53YDL132W PRM3Q08931 133 aa0.99□□□□□ -2.25
CDC53YDL132W RPL36BO14455 100 aaKnown RBP0.99□□□□□ -2.25
CDC53YDL132W RPL36AP05745 100 aaPredicted RBP0.99□□□□□ -2.25
CDC53YDL132W ATG8P38182 117 aaRIP-Chip data0.99□□□□□ -2.25not detected
CDC53YDL132W HUA1P40325 198 aa0.99□□□□□ -2.25
CDC53YDL132W YIL014C-AQ02598 104 aa0.99□□□□□ -2.25
CDC53YDL132W SEN15Q04675 128 aa0.99□□□□□ -2.25
CDC53YDL132W YIL086CP40503 102 aa0.98□□□□□ -2.25
CDC53YDL132W COA4Q05809 96 aa0.98□□□□□ -2.25
CDC53YDL132W YPL261CQ08976 102 aa0.98□□□□□ -2.25
CDC53YDL132W OST5Q92316 86 aa0.98□□□□□ -2.25
CDC53YDL132W LHP1P33399 275 aaKnown RBP0.98□□□□□ -2.25
CDC53YDL132W GNA1P43577 159 aaPredicted RBP0.98□□□□□ -2.25
CDC53YDL132W YOR072WQ08486 104 aa0.98□□□□□ -2.25
CDC53YDL132W YLR365WQ7LIF2 110 aa0.98□□□□□ -2.25
CDC53YDL132W UTP11P34247 250 aaPredicted RBP0.97□□□□□ -2.25
CDC53YDL132W TDA2P40045 126 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms