RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C PFY1P07274 126 aa3.92□□□□□ -1.78
ATG20YDL113C RPL27BP0C2H7 136 aaKnown RBP3.92□□□□□ -1.78
ATG20YDL113C YLR042CQ07990 161 aa3.92□□□□□ -1.78
ATG20YDL113C AIM29P36154 155 aa3.91□□□□□ -1.78
ATG20YDL113C DCV1P43595 202 aa3.91□□□□□ -1.78
ATG20YDL113C BET5Q03630 159 aa3.91□□□□□ -1.78
ATG20YDL113C FCF1Q05498 189 aaPredicted RBP3.91□□□□□ -1.78
ATG20YDL113C YLR050CQ12155 161 aaKnown RBP3.91□□□□□ -1.78
ATG20YDL113C UTR5P32630 166 aa3.91□□□□□ -1.78
ATG20YDL113C PRY2P36110 329 aa3.91□□□□□ -1.78
ATG20YDL113C YKR070WP36151 352 aaKnown RBP3.91□□□□□ -1.78
ATG20YDL113C RRT13P40042 185 aa3.91□□□□□ -1.78
ATG20YDL113C YDR366CP87287 132 aa3.91□□□□□ -1.78
ATG20YDL113C YLR112WQ12130 139 aa3.91□□□□□ -1.78
ATG20YDL113C DFM1Q12743 341 aaKnown RBP3.91□□□□□ -1.78
ATG20YDL113C RPL42AP0CX27 106 aaKnown RBP3.9□□□□□ -1.78
ATG20YDL113C RPL42BP0CX28 106 aaKnown RBP3.9□□□□□ -1.78
ATG20YDL113C HAP3P13434 144 aa3.9□□□□□ -1.78
ATG20YDL113C YCH1P42937 148 aa3.9□□□□□ -1.78
ATG20YDL113C YGL088WP53151 121 aa3.9□□□□□ -1.78
ATG20YDL113C AIM34Q03673 198 aa3.9□□□□□ -1.78
ATG20YDL113C PAU23Q07987 124 aa3.9□□□□□ -1.78
ATG20YDL113C PAU17Q12370 124 aa3.9□□□□□ -1.78
ATG20YDL113C YGR035W-AQ45U48 73 aa3.9□□□□□ -1.78
ATG20YDL113C CWC27Q02770 301 aa3.89□□□□□ -1.79
ATG20YDL113C COA3Q3E7B2 85 aa3.89□□□□□ -1.79
ATG20YDL113C YDL022C-AP0C5L6 82 aa3.89□□□□□ -1.79
ATG20YDL113C YPT53P36019 220 aa3.89□□□□□ -1.79
ATG20YDL113C MPC2P38857 129 aa3.89□□□□□ -1.79
ATG20YDL113C TOS6P48560 102 aa3.89□□□□□ -1.79
ATG20YDL113C YOR008C-AQ3E7B9 74 aa3.89□□□□□ -1.79
ATG20YDL113C YBR209WP38311 105 aa3.88□□□□□ -1.79
ATG20YDL113C YPL080CQ02826 108 aa3.88□□□□□ -1.79
ATG20YDL113C YPL261CQ08976 102 aa3.88□□□□□ -1.79
ATG20YDL113C RPL2AP0CX45 254 aaKnown RBP3.87□□□□□ -1.79
ATG20YDL113C RPL2BP0CX46 254 aaKnown RBP3.87□□□□□ -1.79
ATG20YDL113C RPL16AP26784 199 aaKnown RBP3.87□□□□□ -1.79
ATG20YDL113C YOR097CQ12274 175 aaPredicted RBP3.87□□□□□ -1.79
ATG20YDL113C RPS11AP0CX47 156 aaKnown RBP3.87□□□□□ -1.79
ATG20YDL113C RPS11BP0CX48 156 aaKnown RBP3.87□□□□□ -1.79
ATG20YDL113C ATP15P21306 62 aa3.87□□□□□ -1.79
ATG20YDL113C YCR001WP25347 104 aa3.87□□□□□ -1.79
ATG20YDL113C YPL073CP40323 161 aa3.87□□□□□ -1.79
ATG20YDL113C YDR274CP87283 123 aa3.87□□□□□ -1.79
ATG20YDL113C RPL31AP0C2H8 113 aaKnown RBP3.86□□□□□ -1.79
ATG20YDL113C RPF1P38805 295 aaKnown RBP3.86□□□□□ -1.79
ATG20YDL113C YEL067CP39978 195 aa3.86□□□□□ -1.79
ATG20YDL113C YNL217WP40152 326 aa3.86□□□□□ -1.79
ATG20YDL113C YFR057WP43625 151 aa3.86□□□□□ -1.79
ATG20YDL113C YJR146WP47174 117 aa3.86□□□□□ -1.79
ATG20YDL113C CDC43P18898 376 aa3.85□□□□□ -1.79
ATG20YDL113C YKL044WP36092 106 aa3.85□□□□□ -1.79
ATG20YDL113C AIM11P87275 137 aa3.85□□□□□ -1.79
ATG20YDL113C YLR363W-AQ3E747 85 aa3.85□□□□□ -1.79
ATG20YDL113C HOT13P36078 116 aa3.85□□□□□ -1.79
ATG20YDL113C YIL059CP40520 121 aa3.85□□□□□ -1.79
ATG20YDL113C NRG2P38082 220 aa3.84□□□□□ -1.79
ATG20YDL113C YPS5P53057 165 aa3.84□□□□□ -1.79
ATG20YDL113C YKR041WP36134 250 aa3.83□□□□□ -1.8
ATG20YDL113C VTC1P40046 129 aaRIP-Chip data3.83□□□□□ -1.8not detected
ATG20YDL113C YNR077CP53758 84 aa3.83□□□□□ -1.8
ATG20YDL113C KRE9P39005 276 aa3.83□□□□□ -1.8
ATG20YDL113C CIN5P40917 295 aa3.83□□□□□ -1.8
ATG20YDL113C COX12Q01519 83 aa3.83□□□□□ -1.8
ATG20YDL113C MID2P36027 376 aa3.82□□□□□ -1.8
ATG20YDL113C OXA1P39952 402 aa3.82□□□□□ -1.8
ATG20YDL113C YEL008WP40001 126 aa3.82□□□□□ -1.8
ATG20YDL113C PMP3P87284 55 aa3.82□□□□□ -1.8
ATG20YDL113C ELC1Q03071 99 aa3.82□□□□□ -1.8
ATG20YDL113C YCL021W-AQ96VH3 125 aa3.82□□□□□ -1.8
ATG20YDL113C MBF1O14467 151 aaKnown RBP3.82□□□□□ -1.8
ATG20YDL113C YPR170W-BP0C5R9 85 aa3.82□□□□□ -1.8
ATG20YDL113C RPS8AP0CX39 200 aaKnown RBP3.82□□□□□ -1.8
ATG20YDL113C RPS8BP0CX40 200 aaKnown RBP3.82□□□□□ -1.8
ATG20YDL113C TRP1P00912 224 aa3.81□□□□□ -1.8
ATG20YDL113C RPL28P02406 149 aaKnown RBP3.81□□□□□ -1.8
ATG20YDL113C ERG28P40030 148 aa3.81□□□□□ -1.8
ATG20YDL113C YNL190WP53872 204 aa3.81□□□□□ -1.8
ATG20YDL113C YML079WQ03629 201 aa3.81□□□□□ -1.8
ATG20YDL113C UBC5P15732 148 aa3.8□□□□□ -1.8
ATG20YDL113C SCW10Q04951 389 aa3.8□□□□□ -1.8
ATG20YDL113C YCR075W-AQ3E830 75 aa3.8□□□□□ -1.8
ATG20YDL113C DYN1P36022 4092 aa3.8□□□□□ -1.8
ATG20YDL113C MRP49P32388 137 aa3.8□□□□□ -1.8
ATG20YDL113C YNL198CP40166 100 aa3.8□□□□□ -1.8
ATG20YDL113C YLR194CQ05777 254 aa3.8□□□□□ -1.8
ATG20YDL113C YKL183C-AQ3E765 70 aa3.8□□□□□ -1.8
ATG20YDL113C ARC15P40518 154 aaRIP-Chip data3.79□□□□□ -1.8not detected
ATG20YDL113C IGO2Q9P305 131 aa3.79□□□□□ -1.8
ATG20YDL113C RDS3Q06835 107 aaPredicted RBP3.78□□□□□ -1.8
ATG20YDL113C SHU1P38751 150 aa3.78□□□□□ -1.81
ATG20YDL113C MRPS12P53732 153 aa3.78□□□□□ -1.81
ATG20YDL113C PAI3P01094 68 aa3.77□□□□□ -1.81
ATG20YDL113C YBR219CP38317 127 aa3.77□□□□□ -1.81
ATG20YDL113C YER181CP40097 107 aa3.77□□□□□ -1.81
ATG20YDL113C YMR295CQ03559 197 aa3.77□□□□□ -1.81
ATG20YDL113C YLR281CQ05863 155 aa3.77□□□□□ -1.81
ATG20YDL113C UGX2P32772 223 aa3.76□□□□□ -1.81
ATG20YDL113C SGF11Q03067 99 aa3.76□□□□□ -1.81
ATG20YDL113C CRC1Q12289 327 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms