RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C PPT2Q12036 173 aa0.86□□□□□ -2.27
VAM6YDL077C USV1Q12132 391 aa0.86□□□□□ -2.27
VAM6YDL077C RPS21BQ3E754 87 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C RPL36BO14455 100 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C HHF1P02309 103 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C RPL36AP05745 100 aaPredicted RBP0.86□□□□□ -2.27
VAM6YDL077C YDL022C-AP0C5L6 82 aa0.86□□□□□ -2.27
VAM6YDL077C RPL23AP0CX41 137 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C RPL23BP0CX42 137 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C SPS100P13130 326 aa0.86□□□□□ -2.27
VAM6YDL077C RPL30P14120 105 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C RPL16AP26784 199 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C MIG3P39943 394 aa0.86□□□□□ -2.27
VAM6YDL077C RSM18P40033 138 aa0.86□□□□□ -2.27
VAM6YDL077C YER187WP40102 141 aa0.86□□□□□ -2.27
VAM6YDL077C URM1P40554 99 aaPredicted RBP0.86□□□□□ -2.27
VAM6YDL077C TOS8P53147 276 aa0.86□□□□□ -2.27
VAM6YDL077C YIL014C-AQ02598 104 aa0.86□□□□□ -2.27
VAM6YDL077C YLR194CQ05777 254 aa0.86□□□□□ -2.27
VAM6YDL077C YLR162WQ06235 118 aa0.86□□□□□ -2.27
VAM6YDL077C MIM1Q08176 113 aa0.86□□□□□ -2.27
VAM6YDL077C FIT2Q08906 153 aa0.86□□□□□ -2.27
VAM6YDL077C COX17Q12287 69 aa0.86□□□□□ -2.27
VAM6YDL077C CRC1Q12289 327 aa0.86□□□□□ -2.27
VAM6YDL077C SPO24Q3E752 67 aa0.86□□□□□ -2.27
VAM6YDL077C RPL42AP0CX27 106 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C RPL42BP0CX28 106 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C YHR214C-DP0CX93 97 aa0.86□□□□□ -2.27
VAM6YDL077C HMRA2P0CY13 119 aa0.86□□□□□ -2.27
VAM6YDL077C HOT13P36078 116 aa0.86□□□□□ -2.27
VAM6YDL077C YBR209WP38311 105 aa0.86□□□□□ -2.27
VAM6YDL077C MBB1P39534 108 aa0.86□□□□□ -2.27
VAM6YDL077C YIL029CP40538 142 aa0.86□□□□□ -2.27
VAM6YDL077C PIR5P46999 287 aa0.86□□□□□ -2.27
VAM6YDL077C KNH1P50112 268 aa0.86□□□□□ -2.27
VAM6YDL077C YNR077CP53758 84 aa0.86□□□□□ -2.27
VAM6YDL077C NCE101Q02820 53 aa0.86□□□□□ -2.27
VAM6YDL077C PBP4Q07362 185 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C DAD1Q12248 94 aa0.86□□□□□ -2.27
VAM6YDL077C PIS1P06197 220 aaKnown RBP0.85□□□□□ -2.27
VAM6YDL077C RPS14AP06367 137 aaKnown RBP0.85□□□□□ -2.27
VAM6YDL077C AGA1P32323 725 aa0.85□□□□□ -2.27
VAM6YDL077C CSE2P33308 149 aa0.85□□□□□ -2.27
VAM6YDL077C YKR045CP36138 183 aa0.85□□□□□ -2.27
VAM6YDL077C RPS14BP39516 138 aaKnown RBP0.85□□□□□ -2.27
VAM6YDL077C LST8P41318 303 aa0.85□□□□□ -2.27
VAM6YDL077C YFL051CP43552 160 aa0.85□□□□□ -2.27
VAM6YDL077C YNL234WP53857 426 aa0.85□□□□□ -2.27
VAM6YDL077C SMD1Q02260 146 aaPredicted RBP0.85□□□□□ -2.27
VAM6YDL077C YMR007WQ03675 126 aa0.85□□□□□ -2.27
VAM6YDL077C SPG4Q04438 115 aa0.85□□□□□ -2.27
VAM6YDL077C YLR281CQ05863 155 aa0.85□□□□□ -2.27
VAM6YDL077C YLR042CQ07990 161 aa0.85□□□□□ -2.27
VAM6YDL077C VPS68Q12016 184 aa0.85□□□□□ -2.27
VAM6YDL077C TIM22Q12328 207 aa0.85□□□□□ -2.27
VAM6YDL077C YDR246W-AQ3E763 66 aa0.85□□□□□ -2.27
VAM6YDL077C TSC3Q3E790 80 aa0.85□□□□□ -2.27
VAM6YDL077C YLR307C-AQ3E825 87 aa0.85□□□□□ -2.27
VAM6YDL077C HUG1Q6Q5K6 68 aa0.85□□□□□ -2.27
VAM6YDL077C YHR214C-EQ8TGK0 99 aa0.85□□□□□ -2.27
VAM6YDL077C YLR236CA0A023PZG4 107 aa0.85□□□□□ -2.27
VAM6YDL077C RPB9P27999 122 aa0.85□□□□□ -2.27
VAM6YDL077C YPS5P53057 165 aa0.85□□□□□ -2.27
VAM6YDL077C MPC3P53311 146 aa0.85□□□□□ -2.27
VAM6YDL077C YMR181CQ03231 154 aa0.85□□□□□ -2.27
VAM6YDL077C AIM4P38305 123 aaPredicted RBP0.84□□□□□ -2.27
VAM6YDL077C PCL5P38794 229 aa0.84□□□□□ -2.27
VAM6YDL077C YMR141CP40211 102 aa0.84□□□□□ -2.27
VAM6YDL077C YFL015CP43578 164 aa0.84□□□□□ -2.27
VAM6YDL077C VPS55P47111 140 aa0.84□□□□□ -2.27
VAM6YDL077C ICY1Q04329 127 aa0.84□□□□□ -2.27
VAM6YDL077C SRL1Q08673 210 aa0.84□□□□□ -2.27
VAM6YDL077C YPL261CQ08976 102 aa0.84□□□□□ -2.27
VAM6YDL077C YOR008C-AQ3E7B9 74 aa0.84□□□□□ -2.27
VAM6YDL077C HUB1Q6Q546 73 aa0.84□□□□□ -2.27
VAM6YDL077C YML100W-AQ8TGT0 57 aa0.84□□□□□ -2.27
VAM6YDL077C YBL071CP38185 102 aa0.84□□□□□ -2.28
VAM6YDL077C YER135CP40082 130 aa0.84□□□□□ -2.28
VAM6YDL077C YFR035CP43608 114 aa0.84□□□□□ -2.28
VAM6YDL077C ATP23P53722 227 aa0.84□□□□□ -2.28
VAM6YDL077C MRPS12P53732 153 aa0.84□□□□□ -2.28
VAM6YDL077C RGM1Q00453 211 aa0.84□□□□□ -2.28
VAM6YDL077C YMR321CQ04898 105 aa0.84□□□□□ -2.28
VAM6YDL077C GAT3Q07928 141 aa0.84□□□□□ -2.28
VAM6YDL077C TDA8Q6B2U8 126 aa0.84□□□□□ -2.28
VAM6YDL077C YOR032W-AQ8TGS1 66 aa0.84□□□□□ -2.28
VAM6YDL077C CYR1P08678 2026 aaKnown RBP0.84□□□□□ -2.28
VAM6YDL077C FPR1P20081 114 aaKnown RBP0.84□□□□□ -2.28
VAM6YDL077C HSP150P32478 413 aa0.84□□□□□ -2.28
VAM6YDL077C YKL097CP34245 136 aa0.84□□□□□ -2.28
VAM6YDL077C UTH1P36135 365 aa0.84□□□□□ -2.28
VAM6YDL077C TIM17P39515 158 aa0.84□□□□□ -2.28
VAM6YDL077C YGR018CP53211 109 aa0.84□□□□□ -2.28
VAM6YDL077C TDA7P53882 636 aaPredicted RBP0.84□□□□□ -2.28
VAM6YDL077C IRC21Q04772 201 aa0.84□□□□□ -2.28
VAM6YDL077C PBA1Q05778 276 aa0.84□□□□□ -2.28
VAM6YDL077C YDL241WQ07738 123 aa0.84□□□□□ -2.28
VAM6YDL077C YPR064WQ12492 139 aa0.84□□□□□ -2.28
VAM6YDL077C RPL29P05747 59 aaPredicted RBP0.83□□□□□ -2.28
VAM6YDL077C YCR022CP25620 114 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms