RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH3	YCR092C	HPA3	P39979	161 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	RPL26B	P53221	127 aa	Known RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	FYV12	Q08559	129 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	YLR112W	Q12130	139 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	POC4	Q12245	148 aa	Predicted RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	SCS22	Q6Q595	175 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	HTL1	Q9URQ5	78 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	YAR023C	D6VPM8	179 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	PAU19	P0CE85	124 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	PAU21	P0CE86	164 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	PAU22	P0CE87	164 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	CKS1	P20486	150 aa	Known RBP	0.86	□□□□□ -2.27
MSH3	YCR092C	PAU3	P25610	124 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	MRPL24	P36525	258 aa	Predicted RBP	0.86	□□□□□ -2.27
MSH3	YCR092C	YKE4	P40544	346 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	DCV1	P43595	202 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	ATG27	P46989	271 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	TAD2	P47058	250 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	HHO1	P53551	258 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	YNL122C	P53921	115 aa	Predicted RBP	0.86	□□□□□ -2.27
MSH3	YCR092C	BUD25	P85052	153 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	MAG1	P22134	296 aa	Known RBP	0.86	□□□□□ -2.27
MSH3	YCR092C	SRP14	P38985	146 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	VMA7	P39111	118 aa		0.86	□□□□□ -2.27
MSH3	YCR092C	YJR111C	P47148	283 aa	Known RBP	0.86	□□□□□ -2.27
MSH3	YCR092C	YLR050C	Q12155	161 aa	Known RBP	0.86	□□□□□ -2.27
MSH3	YCR092C	YLR255C	O13574	117 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	YCR001W	P25347	104 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	YCR043C	P25361	127 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	LSM2	P38203	95 aa	Known RBP	0.85	□□□□□ -2.27
MSH3	YCR092C	APS2	Q00381	147 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	GRX5	Q02784	150 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	YLR146W-A	Q2V2P1	62 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	SEC4	P07560	215 aa	Known RBP	0.85	□□□□□ -2.27
MSH3	YCR092C	RPL24B	P24000	155 aa	Known RBP	0.85	□□□□□ -2.27
MSH3	YCR092C	YKL070W	P36087	169 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	RPS29B	P41058	56 aa	Known RBP	0.85	□□□□□ -2.27
MSH3	YCR092C	MMS2	P53152	137 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	GTO3	Q04806	366 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	IRC23	Q08416	157 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	SCM4	P32564	187 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	PAU16	P35994	123 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	YIL163C	P40448	117 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	DAD4	P69851	72 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	YOR008C-A	Q3E7B9	74 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	YNL042W-B	Q3E7Z2	85 aa		0.85	□□□□□ -2.27
MSH3	YCR092C	URA5	P13298	226 aa	Known RBP	0.84	□□□□□ -2.27
MSH3	YCR092C	FCF2	Q12035	217 aa	Predicted RBP	0.84	□□□□□ -2.27
MSH3	YCR092C	YOL097W-A	Q3E7Y9	61 aa		0.84	□□□□□ -2.27
MSH3	YCR092C	YLR236C	A0A023PZG4	107 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	ADH3	P07246	375 aa	Known RBP	0.84	□□□□□ -2.28
MSH3	YCR092C	COX7	P10174	60 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	YCR007C	P25354	239 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	YKL044W	P36092	106 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	RPS29A	P41057	56 aa	Known RBP	0.84	□□□□□ -2.28
MSH3	YCR092C	YGL118C	P53132	145 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	YGR164W	P53291	111 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	YMR007W	Q03675	126 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	ATP16	Q12165	160 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	SNU23	Q12368	194 aa	Predicted RBP	0.84	□□□□□ -2.28
MSH3	YCR092C	YDR010C	Q12426	110 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	YOL085C	Q99345	113 aa		0.84	□□□□□ -2.28
MSH3	YCR092C	YHR073W-A	P0C5N7	58 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	AQY2	P0CD90	149 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YHL018W	P38744	120 aa	Predicted RBP	0.83	□□□□□ -2.28
MSH3	YCR092C	PEX22	P39718	180 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YMR141C	P40211	102 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	RAV2	Q03956	351 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YAL063C-A	Q3E791	96 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YMR230W-A	Q3E7B5	62 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	Q0032	Q9ZZX7	96 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YLR156W	P0CE96	114 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YLR159W	P0CE97	114 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YLR161W	P0CE98	114 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	FUN14	P18411	198 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	YFR057W	P43625	151 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	ICY1	Q04329	127 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	DCN1	Q12395	269 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	RPL27B	P0C2H7	136 aa	Known RBP	0.83	□□□□□ -2.28
MSH3	YCR092C	DDR48	P18899	430 aa	Known RBP	0.83	□□□□□ -2.28
MSH3	YCR092C	COX10	P21592	462 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	OXA1	P39952	402 aa		0.83	□□□□□ -2.28
MSH3	YCR092C	SMT3	Q12306	101 aa	Known RBP	0.83	□□□□□ -2.28
MSH3	YCR092C	FMP49	A0A023PZB3	126 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	MVB12	P42939	101 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	MGR3	Q04472	501 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	AIM29	P36154	155 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	SHU1	P38751	150 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	YGL034C	P53186	121 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	YPR195C	Q06594	109 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	CMC2	Q3E7A4	109 aa		0.82	□□□□□ -2.28
MSH3	YCR092C	SEC11	P15367	167 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	YEL045C	P32616	141 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	YHL005C	P38752	130 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	YEL008W	P40001	126 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	TPT1	Q12272	230 aa	Known RBP	0.81	□□□□□ -2.28
MSH3	YCR092C	YPR014C	Q6B0W2	109 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	TDA8	Q6B2U8	126 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	YMR316C-A	I2HB70	103 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	RPL31A	P0C2H8	113 aa	Known RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms