RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	SWS2	P53937	143 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YNL046W	P53956	172 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	HAL1	Q01766	294 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	SMD1	Q02260	146 aa	Predicted RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	YOR268C	Q08734	132 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	COX17	Q12287	69 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YDR381C-A	Q3E6R5	114 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	NAG1	Q8TGN9	163 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	RPL20A	P0CX23	172 aa	Known RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	RPL20B	P0CX24	172 aa	Predicted RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	RFA2	P26754	273 aa	Known RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	RPL16A	P26784	199 aa	Known RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	YBR209W	P38311	105 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YEL067C	P39978	195 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YNL208W	P40159	199 aa	Known RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	YIL029C	P40538	142 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	OST1	P41543	476 aa	Known RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	PIR5	P46999	287 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	RSM19	P53733	91 aa	Predicted RBP	1.47	□□□□□ -2.17
LRE1	YCL051W	SHH4	Q06236	168 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YPL278C	Q08990	100 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YPR011C	Q12251	326 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YOR192C-C	Q3E736	78 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	YIL046W-A	Q3E7Z4	54 aa		1.47	□□□□□ -2.17
LRE1	YCL051W	QCR9	P22289	66 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	ROX3	P25046	220 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	LDB16	P25587	256 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	RPL16B	P26785	198 aa	Known RBP	1.46	□□□□□ -2.18
LRE1	YCL051W	SPT4	P32914	102 aa	Predicted RBP	1.46	□□□□□ -2.18
LRE1	YCL051W	ECM15	P35195	104 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	SIM1	P40472	476 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	YIA6	P40556	373 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	YFL051C	P43552	160 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	YPI1	P43587	155 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	KEG1	P43614	200 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	YNR077C	P53758	84 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	PIR1	Q03178	341 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	YDR102C	Q03864	110 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	ICY1	Q04329	127 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	API2	Q04413	109 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	RLM1	Q12224	676 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	TDA8	Q6B2U8	126 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	HTL1	Q9URQ5	78 aa		1.46	□□□□□ -2.18
LRE1	YCL051W	YDL022C-A	P0C5L6	82 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	YHR213W	P0CI67	198 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	RPL43A	P0CX25	92 aa	Known RBP	1.45	□□□□□ -2.18
LRE1	YCL051W	RPL43B	P0CX26	92 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	YSY6	P38374	65 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	IST3	P40565	148 aa	Predicted RBP	1.45	□□□□□ -2.18
LRE1	YCL051W	PBP4	Q07362	185 aa	Known RBP	1.45	□□□□□ -2.18
LRE1	YCL051W	IRC23	Q08416	157 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	YDL211C	Q12121	372 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	NCE102	Q12207	173 aa	RIP-Chip data	1.45	□□□□□ -2.18	not detected
LRE1	YCL051W	TRA1	P38811	3744 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	MEC1	P38111	2368 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	HFA1	P32874	2273 aa		1.45	□□□□□ -2.18
LRE1	YCL051W	YBR056W-A	I2HB52	66 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	PFY1	P07274	126 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	SPS100	P13130	326 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	PET8	P38921	284 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	VTC1	P40046	129 aa	RIP-Chip data	1.44	□□□□□ -2.18	not detected
LRE1	YCL051W	PEX17	P40155	199 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YFR035C	P43608	114 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	ICS3	P47034	131 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	MIX14	Q04341	121 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	PBA1	Q05778	276 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YOL160W	Q08321	113 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	HUG1	Q6Q5K6	68 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YLR365W	Q7LIF2	110 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	RPL15A	P05748	204 aa	Known RBP	1.44	□□□□□ -2.18
LRE1	YCL051W	RPS8A	P0CX39	200 aa	Known RBP	1.44	□□□□□ -2.18
LRE1	YCL051W	RPS8B	P0CX40	200 aa	Known RBP	1.44	□□□□□ -2.18
LRE1	YCL051W	HSP12	P22943	109 aa	Known RBP	1.44	□□□□□ -2.18
LRE1	YCL051W	RPB9	P27999	122 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YHR173C	P38864	112 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	PGU1	P47180	361 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	UBC13	P52490	153 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	TOM7	P53507	60 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YDR274C	P87283	123 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YMR295C	Q03559	197 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YLR012C	Q07927	99 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	PPT2	Q12036	173 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YDL009C	Q12210	107 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YDR246W-A	Q3E763	66 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	BPH1	P25356	2167 aa		1.44	□□□□□ -2.18
LRE1	YCL051W	YER145C-A	A0A023PYF4	145 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	YEL045C	P32616	141 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	YKR032W	P36127	104 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	YKR045C	P36138	183 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	YHR180W	P38868	163 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	YAL064W	P39711	94 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	TDA2	P40045	126 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	AIM19	P40502	157 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	ERI1	P62651	68 aa	Known RBP	1.43	□□□□□ -2.18
LRE1	YCL051W	YMR181C	Q03231	154 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	TIM22	Q12328	207 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	RNH203	Q12338	110 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	BLM10	P43583	2143 aa		1.43	□□□□□ -2.18
LRE1	YCL051W	MDM35	O60200	86 aa		1.42	□□□□□ -2.18
LRE1	YCL051W	RPL26A	P05743	127 aa	Known RBP	1.42	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms