RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W YCR050CP25630 102 aa2.81□□□□□ -1.96
CKS1YBR135W TMA19P35691 167 aaKnown RBP2.81□□□□□ -1.96
CKS1YBR135W SPC25P40014 221 aa2.81□□□□□ -1.96
CKS1YBR135W PAM16P42949 149 aa2.81□□□□□ -1.96
CKS1YBR135W YGR164WP53291 111 aa2.81□□□□□ -1.96
CKS1YBR135W PAU12P53343 120 aa2.81□□□□□ -1.96
CKS1YBR135W GRX5Q02784 150 aa2.81□□□□□ -1.96
CKS1YBR135W RIM9Q04734 239 aa2.81□□□□□ -1.96
CKS1YBR135W MED11Q99278 115 aa2.81□□□□□ -1.96
CKS1YBR135W COX9P07255 59 aa2.8□□□□□ -1.96
CKS1YBR135W PAU24P38155 120 aa2.8□□□□□ -1.96
CKS1YBR135W YAR029WP39549 74 aa2.8□□□□□ -1.96
CKS1YBR135W NSE4P43124 402 aa2.8□□□□□ -1.96
CKS1YBR135W LSM8P47093 109 aaKnown RBP2.8□□□□□ -1.96
CKS1YBR135W YMR295CQ03559 197 aa2.8□□□□□ -1.96
CKS1YBR135W YMR103CQ04436 120 aa2.8□□□□□ -1.96
CKS1YBR135W YMR252CQ04814 134 aa2.8□□□□□ -1.96
CKS1YBR135W SCP1Q08873 200 aa2.8□□□□□ -1.96
CKS1YBR135W YCR075W-AQ3E830 75 aa2.8□□□□□ -1.96
CKS1YBR135W HAP3P13434 144 aa2.79□□□□□ -1.96
CKS1YBR135W RRT1P38192 103 aa2.79□□□□□ -1.96
CKS1YBR135W YNR077CP53758 84 aa2.79□□□□□ -1.96
CKS1YBR135W LIP1Q03579 150 aa2.79□□□□□ -1.96
CKS1YBR135W SHH3Q04487 196 aa2.79□□□□□ -1.96
CKS1YBR135W PAU2P32612 120 aa2.78□□□□□ -1.96
CKS1YBR135W SRL3P36167 246 aa2.78□□□□□ -1.96
CKS1YBR135W DSE2P38844 325 aa2.78□□□□□ -1.96
CKS1YBR135W YNL217WP40152 326 aa2.78□□□□□ -1.96
CKS1YBR135W KEI1Q06346 221 aa2.78□□□□□ -1.96
CKS1YBR135W YGL194C-AQ2V2P6 80 aa2.78□□□□□ -1.96
CKS1YBR135W ATG40Q99325 256 aa2.78□□□□□ -1.96
CKS1YBR135W CCS1P40202 249 aaKnown RBP2.77□□□□□ -1.97
CKS1YBR135W MPC3P53311 146 aa2.77□□□□□ -1.97
CKS1YBR135W RPL13AQ12690 199 aaPredicted RBP2.77□□□□□ -1.97
CKS1YBR135W YMR105W-AQ8TGS8 64 aa2.77□□□□□ -1.97
CKS1YBR135W PAM17P36147 197 aa2.76□□□□□ -1.97
CKS1YBR135W YAL064WP39711 94 aa2.76□□□□□ -1.97
CKS1YBR135W SNU13P39990 126 aaKnown RBP2.76□□□□□ -1.97
CKS1YBR135W NMA1Q06178 401 aaKnown RBP2.76□□□□□ -1.97
CKS1YBR135W YOR376W-AQ3E805 51 aa2.76□□□□□ -1.97
CKS1YBR135W YGR035W-AQ45U48 73 aa2.76□□□□□ -1.97
CKS1YBR135W FZF1P32805 299 aa2.75□□□□□ -1.97
CKS1YBR135W YHR130CP38834 111 aa2.75□□□□□ -1.97
CKS1YBR135W ECM31P38122 312 aa2.74□□□□□ -1.97
CKS1YBR135W YHL042WP38729 150 aa2.74□□□□□ -1.97
CKS1YBR135W YFR035CP43608 114 aa2.74□□□□□ -1.97
CKS1YBR135W ATP19P81451 68 aa2.74□□□□□ -1.97
CKS1YBR135W SCS22Q6Q595 175 aa2.74□□□□□ -1.97
CKS1YBR135W SUS1Q6WNK7 96 aa2.74□□□□□ -1.97
CKS1YBR135W YMR090WQ04304 227 aaKnown RBP2.73□□□□□ -1.97
CKS1YBR135W FIT1Q04433 528 aa2.73□□□□□ -1.97
CKS1YBR135W YOR385WQ08909 290 aa2.73□□□□□ -1.97
CKS1YBR135W YOR381W-AQ3E804 55 aa2.73□□□□□ -1.97
CKS1YBR135W YBR209WP38311 105 aa2.72□□□□□ -1.97
CKS1YBR135W THG1P53215 237 aaKnown RBP2.72□□□□□ -1.97
CKS1YBR135W IRC23Q08416 157 aa2.72□□□□□ -1.97
CKS1YBR135W YHP1Q04116 353 aa2.71□□□□□ -1.98
CKS1YBR135W ATG41Q12048 136 aa2.71□□□□□ -1.98
CKS1YBR135W YOR192C-CQ3E736 78 aa2.71□□□□□ -1.98
CKS1YBR135W YOS1Q3E834 85 aa2.71□□□□□ -1.98
CKS1YBR135W DYN1P36022 4092 aa2.71□□□□□ -1.98
CKS1YBR135W QCR10P37299 77 aa2.7□□□□□ -1.98
CKS1YBR135W RAD28Q12021 506 aa2.7□□□□□ -1.98
CKS1YBR135W INO4P13902 151 aa2.69□□□□□ -1.98
CKS1YBR135W UBC4P15731 148 aa2.69□□□□□ -1.98
CKS1YBR135W YGL010WP25338 174 aa2.69□□□□□ -1.98
CKS1YBR135W RPB7P34087 171 aa2.69□□□□□ -1.98
CKS1YBR135W YKL044WP36092 106 aa2.69□□□□□ -1.98
CKS1YBR135W SNF11P38956 169 aa2.69□□□□□ -1.98
CKS1YBR135W RPL13BP40212 199 aaKnown RBP2.69□□□□□ -1.98
CKS1YBR135W KNH1P50112 268 aa2.69□□□□□ -1.98
CKS1YBR135W UPS3Q04006 179 aa2.69□□□□□ -1.98
CKS1YBR135W SOM1Q05676 74 aa2.69□□□□□ -1.98
CKS1YBR135W HOR7Q05827 59 aa2.69□□□□□ -1.98
CKS1YBR135W YOR015WQ12169 119 aa2.69□□□□□ -1.98
CKS1YBR135W YLR365WQ7LIF2 110 aa2.69□□□□□ -1.98
CKS1YBR135W KSH1Q8TGJ3 72 aa2.69□□□□□ -1.98
CKS1YBR135W YHR138CP38841 114 aaPredicted RBP2.68□□□□□ -1.98
CKS1YBR135W TDA2P40045 126 aa2.68□□□□□ -1.98
CKS1YBR135W CUE4Q04201 117 aaPredicted RBP2.68□□□□□ -1.98
CKS1YBR135W YDL241WQ07738 123 aa2.68□□□□□ -1.98
CKS1YBR135W YOL118CQ08259 102 aa2.68□□□□□ -1.98
CKS1YBR135W YLR236CA0A023PZG4 107 aa2.67□□□□□ -1.98
CKS1YBR135W ROX3P25046 220 aa2.67□□□□□ -1.98
CKS1YBR135W EMP24P32803 203 aaKnown RBP2.67□□□□□ -1.98
CKS1YBR135W HPA3P39979 161 aa2.67□□□□□ -1.98
CKS1YBR135W VPS55P47111 140 aa2.67□□□□□ -1.98
CKS1YBR135W ERV14P53173 138 aa2.67□□□□□ -1.98
CKS1YBR135W POP3P53833 195 aaPredicted RBP2.67□□□□□ -1.98
CKS1YBR135W YCL001W-AP87012 153 aa2.67□□□□□ -1.98
CKS1YBR135W YML079WQ03629 201 aa2.67□□□□□ -1.98
CKS1YBR135W YPR108W-AQ3E7B3 70 aa2.67□□□□□ -1.98
CKS1YBR135W MIC10Q96VH5 97 aa2.67□□□□□ -1.98
CKS1YBR135W MRPL44P19956 98 aa2.66□□□□□ -1.98
CKS1YBR135W MRPL11P36521 249 aaPredicted RBP2.66□□□□□ -1.98
CKS1YBR135W YEL067CP39978 195 aa2.66□□□□□ -1.98
CKS1YBR135W GTT1P40582 234 aa2.66□□□□□ -1.98
CKS1YBR135W GPI19Q04082 140 aa2.66□□□□□ -1.98
CKS1YBR135W PRM3Q08931 133 aa2.66□□□□□ -1.98
CKS1YBR135W YDR029WQ12111 104 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms