RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CALN1Q9BXU9 219 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 MLXIPLQ9NP71 852 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 TMEM120BA0PK00 339 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 UNCXA6NJT0 531 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 C2CD4BA6NLJ0 364 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 TCEA3O75764 348 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 KIAA0754O94854 1291 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 GPD1P21695 349 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 ZNF143P52747 638 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 NRLP54845 237 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 RNF187Q5TA31 235 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 SLC27A1Q6PCB7 646 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 TADA2BQ86TJ2 420 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 TTC30AQ86WT1 665 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 NT5DC4Q86YG4 428 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 LRRC34Q8IZ02 419 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 CMASQ8NFW8 434 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 GCOM2Q9BZD3 368 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 FLRT1Q9NZU1 646 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 NAALADL1Q9UQQ1 740 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 EFR3BQ9Y2G0 817 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 ATXN2Q99700 1313 aaKnown RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 RALGAPA2Q2PPJ7 1873 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 A0A087WUV0 522 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 PDGFRAP16234 1089 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 AKAP5P24588 427 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 MORF4L2Q15014 288 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 ANKRD22Q5VYY1 191 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 PMF1Q6P1K2 205 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 NPNTQ6UXI9 565 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 UNC45BQ8IWX7 931 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 OTUD6BQ8N6M0 293 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 ANKRD42Q8N9B4 389 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 CFAP57Q96MR6 1250 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.79■□□□□ 0.44
PHGDH-229ENST00000641891 ASNSD1Q9NWL6 643 aa17.79■□□□□ 0.44
PHGDH-229ENST00000641891 RRN3P2A6NIE6 340 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 CELF2O95319 508 aaKnown RBP17.78■□□□□ 0.44
PHGDH-229ENST00000641891 CYP2C9P11712 490 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 MPP2Q14168 576 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 TMEM40Q8WWA1 233 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 FOXP3Q9BZS1 431 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 DPEP3Q9H4B8 488 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 KCNK9Q9NPC2 374 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 LGALS13Q9UHV8 139 aa17.78■□□□□ 0.44
PHGDH-229ENST00000641891 SLC15A5A6NIM6 579 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 RECQL4O94761 1208 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 F2P00734 622 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 GCAP28676 217 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 CTCFP49711 727 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-229ENST00000641891 ZNF200P98182 395 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-229ENST00000641891 ATP11AP98196 1134 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 ZBTB6Q15916 424 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 OLFML2BQ68BL8 750 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 ZBED8Q8IZ13 594 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 CACNA2D3Q8IZS8 1091 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 DNAJB3Q8WWF6 145 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 CNPY3Q9BT09 278 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 PLEKHA5Q9HAU0 1116 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 GPATCH2LQ9NWQ4 482 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 KLK14Q9P0G3 267 aa17.77■□□□□ 0.44
PHGDH-229ENST00000641891 GNEQ9Y223 722 aaKnown RBP17.77■□□□□ 0.44
PHGDH-229ENST00000641891 A6NJR5 290 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 GABBR2O75899 941 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 ABHD2P08910 425 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 DARSP14868 501 aaKnown RBP17.77■□□□□ 0.43
PHGDH-229ENST00000641891 ATP5DP30049 168 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 RPL22P35268 128 aaKnown RBP17.77■□□□□ 0.43
PHGDH-229ENST00000641891 PCK1P35558 622 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 CDH6P55285 790 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 EIF3EP60228 445 aaKnown RBP17.77■□□□□ 0.43
PHGDH-229ENST00000641891 MTM1Q13496 603 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 STAT4Q14765 748 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 TMED2Q15363 201 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC142Q17RM4 750 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC14Q49A88 953 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 PKDCCQ504Y2 493 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 GKAP1Q5VSY0 366 aaPredicted RBP17.77■□□□□ 0.43
PHGDH-229ENST00000641891 NOTUMQ6P988 496 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 ANKMY2Q8IV38 441 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 SRRM1Q8IYB3 904 aaKnown RBP17.77■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC13Q8IYE1 715 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 CPT1BQ92523 772 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 EURLQ9NYK6 297 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 GGA2Q9UJY4 613 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 KIAA1257Q9ULG3 409 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 SHOC2Q9UQ13 582 aa17.77■□□□□ 0.43
PHGDH-229ENST00000641891 FARP1Q9Y4F1 1045 aaPredicted RBP17.77■□□□□ 0.43
PHGDH-229ENST00000641891 TCRBV7S3A2A0A539 114 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 CDH16O75309 829 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 BRAFP15056 766 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 YARSP54577 528 aaKnown RBP17.76■□□□□ 0.43
PHGDH-229ENST00000641891 PDIA2Q13087 525 aaKnown RBP17.76■□□□□ 0.43
PHGDH-229ENST00000641891 ACAP1Q15027 740 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 SPRED3Q2MJR0 410 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 OLFML1Q6UWY5 402 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 TLK2Q86UE8 772 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms