RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 FBXW11Q9UKB1 542 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 REXO2Q9Y3B8 237 aaKnown RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 PCDHB5Q9Y5E4 795 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 EPN1Q9Y6I3 576 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 GREB1Q4ZG55 1949 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 PLXNA3P51805 1871 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TCRBV5S1A1TA0A578 114 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 SOWAHDA6NJG2 315 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 EIF3CLB5ME19 914 aaKnown RBP9.64□□□□□ -0.87
SCARB2-225ENST00000640900 RFXAPO00287 272 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TULP2O00295 520 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 ARHGAP6O43182 974 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TGM5O43548 720 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 NDUFA10O95299 355 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 MMP8P22894 467 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 BDNFP23560 247 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 CYP2F1P24903 491 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 KIF11P52732 1056 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TCEAL1Q15170 157 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 GOLGA7BQ2TAP0 167 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 HS1BP3Q53T59 392 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 PLPP4Q5VZY2 271 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 ACAD10Q6JQN1 1059 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 PMF1Q6P1K2 205 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 MON1BQ7L1V2 547 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 SPATA2LQ8IUW3 424 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-225ENST00000640900 GPIHBP1Q8IV16 184 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TMEM35BQ8NCS4 154 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 VCPIP1Q96JH7 1222 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 EIF3CQ99613 913 aaKnown RBP9.64□□□□□ -0.87
SCARB2-225ENST00000640900 CDCA3Q99618 268 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-225ENST00000640900 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 RHOBTB2Q9BYZ6 727 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 ENTPD7Q9NQZ7 604 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 TAS2R14Q9NYV8 317 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 USP3Q9Y6I4 520 aa9.64□□□□□ -0.87
SCARB2-225ENST00000640900 M0QYV0 167 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 CLSTN1O94985 981 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 CPB1P15086 417 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ATF6P18850 670 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 TNFAIP3P21580 790 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ADORA2BP29275 332 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 HOXA9P31269 272 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 TUFMP49411 452 aaKnown RBP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ADCY1Q08828 1119 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 DUSP4Q13115 394 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PDCLQ13371 301 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ADGRE1Q14246 886 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 MTF1Q14872 753 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 GRIN2CQ14957 1233 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PTPROQ16827 1216 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 CTC1Q2NKJ3 1217 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PTPN20Q4JDL3 420 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 TDRD12Q587J7 1177 aaKnown RBP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 C10orf76Q5T2E6 689 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PM20D1Q6GTS8 502 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PPP1R2P3Q6NXS1 205 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ALKBH5Q6P6C2 394 aaKnown RBP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ZNF662Q6ZS27 426 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 BHLHA9Q7RTU4 235 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 ADGRD2Q7Z7M1 963 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PIGZQ86VD9 579 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 UBA3Q8TBC4 463 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 SECISBP2LQ93073 1101 aaKnown RBP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 MYRFLQ96LU7 910 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 CCDC42Q96M95 316 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 CPXM1Q96SM3 734 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 KCNK16Q96T55 309 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 TTLL2Q9BWV7 592 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PLEKHA4Q9H4M7 779 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 KCND1Q9NSA2 647 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 COMMD8Q9NX08 183 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 INTUQ9ULD6 942 aa9.63□□□□□ -0.87
SCARB2-225ENST00000640900 PRRC2BQ5JSZ5 2229 aaKnown RBP9.63□□□□□ -0.87
SCARB2-225ENST00000640900 EYSQ5T1H1 3165 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 F8VP50 259 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 TRIM66O15016 1216 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 PJA2O43164 708 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 RTN2O75298 545 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 AP1G2O75843 785 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 GLUD1P00367 558 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 FTLP02792 175 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 HMGA1P17096 107 aaKnown RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 SCNN1AP37088 669 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 CYP27A1Q02318 531 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 GFPT1Q06210 699 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 HYAL1Q12794 435 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 NAA35Q5VZE5 725 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 ARCQ7LC44 396 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 GPRIN1Q7Z2K8 1008 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 VPS36Q86VN1 386 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 PASD1Q8IV76 773 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms