RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TRAPPC11Q7Z392 1133 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 PPFIBP1Q86W92 1011 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ECHDC2Q86YB7 292 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 EHBP1Q8NDI1 1231 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 APBB2Q92870 758 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 LPPQ93052 612 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 VWCEQ96DN2 955 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 IQCDQ96DY2 449 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ANKRD36BP1Q96IX9 119 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 HSH2DQ96JZ2 352 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ZNF830Q96NB3 372 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 GANQ9H2C0 597 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 C1orf112Q9NSG2 853 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 RAB20Q9NX57 234 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 GIT1Q9Y2X7 761 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 DERAQ9Y315 318 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 PCDHB14Q9Y5E9 798 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 MICAL3Q7RTP6 2002 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 CEP290O15078 2479 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 SMIM28A0A1B0GU29 152 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 XYLBO75191 536 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 ATE1O95260 518 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 HLA-DRAP01903 254 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 KCNE1P15382 129 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 RAG1P15918 1043 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 CASP14P31944 242 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 PIK3CAP42336 1068 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 GSDMDP57764 484 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 ZBTB6Q15916 424 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 GLRA4Q5JXX5 417 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 KLHDC7AQ5VTJ3 777 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 SCARA3Q6AZY7 606 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 VHLLQ6RSH7 139 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 CCDC186Q7Z3E2 898 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 DEFB128Q7Z7B8 93 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 KDF1Q8NAX2 398 aaPredicted RBP8.51□□□□□ -1.05
SCARB2-220ENST00000640076 RNF169Q8NCN4 708 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 RHBDD1Q8TEB9 315 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 CACTINQ8WUQ7 758 aaKnown RBP8.51□□□□□ -1.05
SCARB2-220ENST00000640076 PGBD4Q96DM1 585 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 ABHD8Q96I13 439 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 ZFP42Q96MM3 310 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 TCF7L1Q9HCS4 588 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 CAPN11Q9UMQ6 739 aa8.51□□□□□ -1.05
SCARB2-220ENST00000640076 LUC7L2Q9Y383 392 aaKnown RBP8.51□□□□□ -1.05
SCARB2-220ENST00000640076 A0A1W2PQJ5 194 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ARL5CA6NH57 179 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TK2O00142 265 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 PTGESO14684 152 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 MFAP3LO75121 409 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 EOMESO95936 686 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CST3P01034 146 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TPM1P09493 284 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 UCHL3P15374 230 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 MLH1P40692 756 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 AFF1P51825 1210 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GOLGA8FQ08AF8 430 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GOLGA8DPQ0D2H9 430 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 MFSD5Q6N075 450 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CCNJLQ8IV13 435 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GSTCDQ8NEC7 633 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 PPHLN1Q8NEY8 458 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 COG1Q8WTW3 980 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GAD1Q99259 594 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CDC6Q99741 560 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 PI4K2AQ9BTU6 479 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 EDEM3Q9BZQ6 932 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 RSAD1Q9HA92 442 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 UBN1Q9NPG3 1134 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CEP72Q9P209 647 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 SIX4Q9UIU6 781 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 FBXL5Q9UKA1 691 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 PLAGL2Q9UPG8 496 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 SCN1AP35498 2009 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 AKR1B15C9JRZ8 316 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ZC3H11AO75152 810 aaKnown RBP eCLIP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ASS1P00966 412 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ITGB3P05106 788 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CSF2RAP15509 400 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 KRT9P35527 623 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ADKP55263 362 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 POLR2FP61218 127 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ZBED6P86452 979 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TMPRSS15P98073 1019 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 LRMPQ12912 555 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CNKSR3Q6P9H4 555 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GJB7Q6PEY0 223 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CNGA4Q8IV77 575 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ARHGEF19Q8IW93 802 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM130Q8N3G9 435 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 CCDC150Q8NCX0 1101 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 C18orf25Q96B23 403 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 PPP1R10Q96QC0 940 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 NAA15Q9BXJ9 866 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms