RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.98■□□□□ 0.631e-18■■■■■ 447.2
SPIN3-220ENST00000639257 CISHQ9NSE2 258 aa18.98■□□□□ 0.63
SPIN3-220ENST00000639257 EHD2Q9NZN4 543 aa18.98■□□□□ 0.63
SPIN3-220ENST00000639257 GCNT4Q9P109 453 aa18.98■□□□□ 0.63
SPIN3-220ENST00000639257 FBXL21Q9UKT6 434 aa18.98■□□□□ 0.63
SPIN3-220ENST00000639257 MAGED2Q9UNF1 606 aaPredicted RBP18.98■□□□□ 0.63
SPIN3-220ENST00000639257 ATP8B3O60423 1300 aa18.98■□□□□ 0.63
SPIN3-220ENST00000639257 F5P12259 2224 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 FGFR1OPO95684 399 aaKnown RBP18.97■□□□□ 0.63
SPIN3-220ENST00000639257 CCDC130P13994 396 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 ANXA13P27216 316 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 MLLT6P55198 1093 aaPredicted RBP18.97■□□□□ 0.63
SPIN3-220ENST00000639257 PRKCQQ04759 706 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 ORC1Q13415 861 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 CUL2Q13617 745 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 GRM2Q14416 872 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 CT47A1Q5JQC4 288 aaPredicted RBP18.97■□□□□ 0.63
SPIN3-220ENST00000639257 WDR44Q5JSH3 913 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 TXNDC8Q6A555 127 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 TMEM105Q8N8V8 129 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 SLC2A14Q8TDB8 520 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 MRPS31Q92665 395 aaKnown RBP18.97■□□□□ 0.63
SPIN3-220ENST00000639257 KCNK16Q96T55 309 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 COMMD8Q9NX08 183 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 RAPGEFL1Q9UHV5 662 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 COL4A3Q01955 1670 aa18.97■□□□□ 0.63
SPIN3-220ENST00000639257 CHADO15335 359 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 BEST1O76090 585 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 OLFM2O95897 454 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 TCF3P15923 654 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 ERCC5P28715 1186 aaPredicted RBP18.96■□□□□ 0.63
SPIN3-220ENST00000639257 PPP3CCP48454 512 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 RAD23BP54727 409 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 KCNH2Q12809 1159 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 SLC44A4Q53GD3 710 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 SNX30Q5VWJ9 437 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 NUP93Q8N1F7 819 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 MAB21L3Q8N8X9 362 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 SLC4A11Q8NBS3 891 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 OVCA2Q8WZ82 227 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 IRF7Q92985 503 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
SPIN3-220ENST00000639257 KIF9Q9HAQ2 790 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 PNPLA8Q9NP80 782 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 KRT82Q9NSB4 513 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 CA14Q9ULX7 337 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 HCN4Q9Y3Q4 1203 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 CACNA1HO95180 2353 aa18.96■□□□□ 0.63
SPIN3-220ENST00000639257 ZNF840PA6NDX5 716 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 HHLA1C9JL84 531 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CLSTN1O94985 981 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 RTN3O95197 1032 aaPredicted RBP18.95■□□□□ 0.62
SPIN3-220ENST00000639257 ZDHHC11BP0C7U3 371 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CCDC192P0DO97 292 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CD58P19256 250 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 MLF2Q15773 248 aaPredicted RBP18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CLEC20AQ6ZU45 233 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 ZNF687Q8N1G0 1237 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CELF5Q8N6W0 485 aaKnown RBP18.95■□□□□ 0.62
SPIN3-220ENST00000639257 RIN3Q8TB24 985 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CYFIP2Q96F07 1278 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 SLC22A12Q96S37 553 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 TBC1D17Q9HA65 648 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 FAM49BQ9NUQ9 324 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 DLGAP2Q9P1A6 1054 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 CCL26Q9Y258 94 aa18.95■□□□□ 0.62
SPIN3-220ENST00000639257 TICRRQ7Z2Z1 1910 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 PI15O43692 258 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 AP1G2O75843 785 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 AFPP02771 609 aaKnown RBP18.94■□□□□ 0.62
SPIN3-220ENST00000639257 ACO1P21399 889 aaKnown RBP18.94■□□□□ 0.62
SPIN3-220ENST00000639257 TBXAS1P24557 533 aaPredicted RBP18.94■□□□□ 0.62
SPIN3-220ENST00000639257 GDI1P31150 447 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 SLC5A3P53794 718 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 ARHGAP17Q68EM7 881 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 BPIFB1Q8TDL5 484 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 TMEM176AQ96HP8 235 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 SHDQ96IW2 340 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 CNOT6LQ96LI5 555 aaKnown RBP18.94■□□□□ 0.62
SPIN3-220ENST00000639257 OSBPL6Q9BZF3 934 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 MFSD1Q9H3U5 465 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 BRD9Q9H8M2 597 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 TDP1Q9NUW8 608 aa18.94■□□□□ 0.62
SPIN3-220ENST00000639257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.94■□□□□ 0.62
SPIN3-220ENST00000639257 HELZP42694 1942 aaKnown RBP18.94■□□□□ 0.62
SPIN3-220ENST00000639257 C2orf78A6NCI8 922 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 GOLGA6L22H0YM25 854 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 ZNF263O14978 683 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 OAS1P00973 400 aaKnown RBP18.93■□□□□ 0.62
SPIN3-220ENST00000639257 FAM200BP0CF97 657 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 TRIM21P19474 475 aaKnown RBP18.93■□□□□ 0.62
SPIN3-220ENST00000639257 AVPR1AP37288 418 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 GCNT1Q02742 428 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 TAF10Q12962 218 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 USP4Q13107 963 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 ARHGAP29Q52LW3 1261 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 PPP1R26Q5T8A7 1209 aaPredicted RBP18.93■□□□□ 0.62
SPIN3-220ENST00000639257 KIAA1958Q8N8K9 716 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 EHBP1Q8NDI1 1231 aa18.93■□□□□ 0.62
SPIN3-220ENST00000639257 NT5C1BQ96P26 610 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms