RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SIK2Q9H0K1 926 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 MARCOQ9UEW3 520 aaPredicted RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 RNF112Q9ULX5 631 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 PADI4Q9UM07 663 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 ASNSP08243 561 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 ERVK-10P10266 1014 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 GEMIN4P57678 1058 aaKnown RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 NANOGNBQ7Z5D8 188 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 RNF25Q96BH1 459 aaPredicted RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 C1QTNF1Q9BXJ1 281 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 TSR3Q9UJK0 312 aaKnown RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 A0A0D9SFI3 127 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 LINC00854A0A1B0GVQ3 168 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 OASLQ15646 514 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 C9orf16Q9BUW7 83 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 TMEM138Q9NPI0 162 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 RBAKQ9NYW8 714 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 STK36Q9NRP7 1315 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 O00370 1275 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 AP3D1O14617 1153 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 FDFT1P37268 417 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 DRAP1Q14919 205 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 PRELPP51888 382 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 ERO1BQ86YB8 467 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 CDC16Q13042 620 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 GDAQ9Y2T3 454 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 ATP6V1B2P21281 511 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 VBP1P61758 197 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 SLC38A7Q9NVC3 462 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 HOXB6P17509 224 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 RCAN1P53805 252 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 FAM172AQ8WUF8 416 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 PCM1Q15154 2024 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 EIF4E1BA6NMX2 242 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 PRKAR1AP10644 381 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 ALOX12P18054 663 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 MRNIPQ6NTE8 343 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 EXOC3L1Q86VI1 746 aa19.99■□□□□ 0.79
CACNA1A-257ENST00000638009 TMEM120BA0PK00 339 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 SRGAP2O75044 1071 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 MAGEA2P43356 314 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 AKR1D1P51857 326 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 HK2P52789 917 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 ANAPC2Q9UJX6 822 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 STX16-NPEPL1H3BU86 382 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 STX16O14662 325 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 ARF4P18085 180 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 RERGLQ9H628 205 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 VPS51Q9UID3 782 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 ATP6AP1LQ52LC2 224 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 ZBTB49Q6ZSB9 765 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 PCSK1NQ9UHG2 260 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 MDM4O15151 490 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 PRMT3O60678 531 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 SCRN3Q0VDG4 424 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 ATP1A4Q13733 1029 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 POLD3Q15054 466 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 SPATA2LQ8IUW3 424 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 MAGEB18Q96M61 343 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 NLNQ9BYT8 704 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 SLC39A10Q9ULF5 831 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 MYRFQ9Y2G1 1151 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 TSPAN19P0C672 248 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 RPTNQ6XPR3 784 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 MTA1Q13330 715 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 TMEM63BQ5T3F8 832 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 LRRC71Q8N4P6 559 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 AADATQ8N5Z0 425 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 C11orf70Q9BRQ4 267 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 NPC1L1Q9UHC9 1359 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 A0A087WXM4 84 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 METTL21EPA6NDL7 271 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 HOXD10P28358 340 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 CORO7P57737 925 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 CIDEBQ9UHD4 219 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 SYNPO2Q9UMS6 1093 aa19.98■□□□□ 0.79
CACNA1A-257ENST00000638009 KHDRBS3O75525 346 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 EPB42P16452 691 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 LBPP18428 481 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 SPICE1Q8N0Z3 855 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 KCTD14Q9BQ13 255 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 DDX47Q9H0S4 455 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 BHMT2Q9H2M3 363 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 TNFRSF21O75509 655 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 TMEM26Q6ZUK4 368 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 FICDQ9BVA6 458 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 ABCC4O15439 1325 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 AHCYL1O43865 530 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 OR6B1O95007 311 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 AP1S3Q96PC3 154 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 EMILIN2Q9BXX0 1053 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 ZNF879B4DU55 563 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 VPS4BO75351 444 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 SLC7A14Q8TBB6 771 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 FNIP1Q8TF40 1166 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 VAV1P15498 845 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 ZRANB3Q5FWF4 1079 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 MYLPFQ96A32 169 aa19.97■□□□□ 0.79
CACNA1A-257ENST00000638009 SNX12Q9UMY4 172 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms