RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 GPR161Q8N6U8 529 aaKnown RBP21.41■■□□□ 1.02
CLN6-222ENST00000637667 SH3RF2Q8TEC5 729 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 PARD3BQ8TEW8 1205 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 OSCP1Q8WVF1 389 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 CHAMP1Q96JM3 812 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 C8orf48Q96LL4 319 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 TTLL2Q9BWV7 592 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 KCTD10Q9H3F6 313 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 DPEP3Q9H4B8 488 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 ECT2Q9H8V3 914 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 VRTNQ9H8Y1 702 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 EHD2Q9NZN4 543 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 TRPM5Q9NZQ8 1165 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 ARHGAP26Q9UNA1 814 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 HPSEQ9Y251 543 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 ZNF638Q14966 1978 aaKnown RBP21.41■■□□□ 1.02
CLN6-222ENST00000637667 OBSL1O75147 1896 aa21.41■■□□□ 1.02
CLN6-222ENST00000637667 SPTBN2O15020 2390 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 LRRIQ3A6PVS8 624 aaPredicted RBP21.4■■□□□ 1.02
CLN6-222ENST00000637667 A8MXQ7 604 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 MYL1P05976 194 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 IFNAR2P48551 515 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 PDE6CP51160 858 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 CLDN10P78369 228 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 HEATR6Q6AI08 1181 aaKnown RBP21.4■■□□□ 1.02
CLN6-222ENST00000637667 LONP2Q86WA8 852 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 B3GALNT2Q8NCR0 500 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 TMEM174Q8WUU8 243 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 ZNF518BQ9C0D4 1074 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 ELOVL4Q9GZR5 314 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 SMYD3Q9H7B4 428 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 ZDHHC9Q9Y397 364 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 WNT6Q9Y6F9 365 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 NCOR2Q9Y618 2525 aa21.4■■□□□ 1.02
CLN6-222ENST00000637667 HRO43593 1189 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 TCF3P15923 654 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 PFKLP17858 780 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 CNR2P34972 360 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 GJA4P35212 333 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 CACNA2D1P54289 1103 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 NOP14P78316 857 aaKnown RBP21.39■■□□□ 1.01
CLN6-222ENST00000637667 NCOA4Q13772 614 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 SIM2Q14190 667 aaPredicted RBP21.39■■□□□ 1.01
CLN6-222ENST00000637667 ZNF699Q32M78 642 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 LAIR1Q6GTX8 287 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 PKN3Q6P5Z2 889 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 PRR23BQ6ZRT6 265 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 ATP2A3Q93084 1043 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 P2RY13Q9BPV8 354 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 B3GNT5Q9BYG0 378 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 TMEM30AQ9NV96 361 aa21.39■■□□□ 1.01
CLN6-222ENST00000637667 ZNF840PA6NDX5 716 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 CLDN5O00501 218 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 PDXKO00764 312 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 CLSTN1O94985 981 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 EGFP01133 1207 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 C4BPAP04003 597 aaKnown RBP21.38■■□□□ 1.01
CLN6-222ENST00000637667 NR3C1P04150 777 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 DRD1P21728 446 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 HOXC13P31276 330 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 SYKP43405 635 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 PPP3CCP48454 512 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 GALK1P51570 392 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 SRSF5Q13243 272 aaKnown RBP21.38■■□□□ 1.01
CLN6-222ENST00000637667 PUM1Q14671 1186 aaKnown RBP eCLIP21.38■■□□□ 1.01
CLN6-222ENST00000637667 EML3Q32P44 896 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 ZNF667Q5HYK9 610 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 NAIF1Q69YI7 327 aaPredicted RBP21.38■■□□□ 1.01
CLN6-222ENST00000637667 EXOC4Q96A65 974 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 FBRSL1Q9HCM7 1045 aaKnown RBP21.38■■□□□ 1.01
CLN6-222ENST00000637667 SDK1Q7Z5N4 2213 aa21.38■■□□□ 1.01
CLN6-222ENST00000637667 ATG13O75143 517 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 VNN1O95497 513 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 RPN1P04843 607 aaKnown RBP21.37■■□□□ 1.01
CLN6-222ENST00000637667 TGM1P22735 817 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 CDH8P55286 799 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 TAF10Q12962 218 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 SCARA5Q6ZMJ2 495 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 WDR5BQ86VZ2 330 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 LINC00597Q9H2U6 94 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 DLL3Q9NYJ7 618 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 USP18Q9UMW8 372 aa21.37■■□□□ 1.01
CLN6-222ENST00000637667 PTPRDP23468 1912 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 GREB1Q4ZG55 1949 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 FAM237AA0A1B0GTK4 181 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 RNF40O75150 1001 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 RETP07949 1114 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 RAP1GAPP47736 663 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 NDUFA8P51970 172 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 DLG4P78352 724 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 SLC7A9P82251 487 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 ZXDBP98169 803 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 LMNB2Q03252 620 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 NR1H3Q13133 447 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 RSPO4Q2I0M5 234 aaPredicted RBP21.36■■□□□ 1.01
CLN6-222ENST00000637667 ZACNQ401N2 412 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 DGLUCYQ7Z3D6 616 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 TMC2Q8TDI7 906 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 ELMO3Q96BJ8 720 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms