RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 MMP17Q9ULZ9 603 aa9.41□□□□□ -0.9
CLN8-214ENST00000637594 WASF3Q9UPY6 502 aa9.41□□□□□ -0.9
CLN8-214ENST00000637594 ACACBO00763 2458 aa9.41□□□□□ -0.9
CLN8-214ENST00000637594 CACNA1BQ00975 2339 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 A0A087X0B3 334 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 CDX4O14627 284 aaPredicted RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 KHNYNO15037 678 aaKnown RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 HCRTO43612 131 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 PRPF6O94906 941 aaKnown RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 OAS1P00973 400 aaKnown RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 CST3P01034 146 aaPredicted RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 TNNC2P02585 160 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 PROS1P07225 676 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 CEACAM1P13688 526 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 IDEP14735 1019 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 CSRP1P21291 193 aaKnown RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 BDNFP23560 247 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 GNL1P36915 607 aaPredicted RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 GRIK1P39086 918 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 TNFRSF4P43489 277 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 USP46P62068 366 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 CREB5Q02930 508 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 RESTQ13127 1097 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 CCDC142Q17RM4 750 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 SNX30Q5VWJ9 437 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 DAB2IPQ5VWQ8 1189 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 RHBDF2Q6PJF5 856 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 STXBP4Q6ZWJ1 553 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 EPM2AIP1Q7L775 607 aaPredicted RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 TRAPPC11Q7Z392 1133 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 WDR49Q8IV35 697 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 CCDC65Q8IXS2 484 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 TSTD1Q8NFU3 115 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 PCED1BQ96HM7 432 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 SMOC1Q9H4F8 434 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 KBTBD4Q9NVX7 518 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 IL37Q9NZH6 218 aa9.4□□□□□ -0.9
CLN8-214ENST00000637594 EVLQ9UI08 416 aaPredicted RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 R3HCC1Q9Y3T6 440 aaKnown RBP9.4□□□□□ -0.9
CLN8-214ENST00000637594 EPG5Q9HCE0 2579 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 PTPRJQ12913 1337 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 E2F8A0AVK6 867 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 LNP1A1A4G5 178 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 C4orf47A7E2U8 309 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 EIF3DO15371 548 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLN8-214ENST00000637594 PDGFRBP09619 1106 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 PTPN1P18031 435 aaKnown RBP9.39□□□□□ -0.91
CLN8-214ENST00000637594 SYT1P21579 422 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 STAT6P42226 847 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 KIR2DL1P43626 348 aaPredicted RBP9.39□□□□□ -0.91
CLN8-214ENST00000637594 DHCR24Q15392 516 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 C2orf27AQ580R0 203 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 TDRD10Q5VZ19 366 aaKnown RBP9.39□□□□□ -0.91
CLN8-214ENST00000637594 TCEAL6Q6IPX3 200 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 FILIP1Q7Z7B0 1213 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 DDX42Q86XP3 938 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLN8-214ENST00000637594 CBWD2Q8IUF1 395 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 KDF1Q8NAX2 398 aaPredicted RBP9.39□□□□□ -0.91
CLN8-214ENST00000637594 OVCA2Q8WZ82 227 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 TCEAL3Q969E4 200 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 MYLPFQ96A32 169 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 OTUB2Q96DC9 234 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 PNKPQ96T60 521 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 EDEM2Q9BV94 578 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 PANK2Q9BZ23 570 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 TNMDQ9H2S6 317 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 ZSCAN16Q9H4T2 348 aaPredicted RBP9.39□□□□□ -0.91
CLN8-214ENST00000637594 UPF2Q9HAU5 1272 aaKnown RBP9.39□□□□□ -0.91
CLN8-214ENST00000637594 COMMD8Q9NX08 183 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 TBC1D14Q9P2M4 693 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 SPTBN2O15020 2390 aa9.39□□□□□ -0.91
CLN8-214ENST00000637594 OBSL1O75147 1896 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 EML5Q05BV3 1969 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 UPK3BL1B0FP48 263 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 UPK3BL2E5RIL1 263 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TGFB1I1O43294 461 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 ALDH1A2O94788 518 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 CYP17A1P05093 508 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 ANXA13P27216 316 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 ATICP31939 592 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 P2RY2P41231 377 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 GRIA2P42262 883 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 DPP6P42658 865 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 SLC6A11P48066 632 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 NASPP49321 788 aaPredicted RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 PSMC1P62191 440 aaKnown RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 AMPD3Q01432 767 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 CYP27A1Q02318 531 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TAF10Q12962 218 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 BYSLQ13895 437 aaKnown RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 PSMD6Q15008 389 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 E2F4Q16254 413 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 LMBRD2Q68DH5 695 aaPredicted RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 PSAPL1Q6NUJ1 521 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms