RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GJB7Q6PEY0 223 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 PARM1Q6UWI2 310 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 DENND5BQ6ZUT9 1274 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 ENOSF1Q7L5Y1 443 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 APTXQ7Z2E3 356 aaKnown RBP10.32□□□□□ -0.76
LINC00339-210ENST00000635675 NXPE3Q969Y0 559 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 FAM81BQ96LP2 452 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 TTLL2Q9BWV7 592 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 DUSP16Q9BY84 665 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 GPR88Q9GZN0 384 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 ATXN3LQ9H3M9 355 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 IL37Q9NZH6 218 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 IGSF9Q9P2J2 1179 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 APEX2Q9UBZ4 518 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 MUTYHQ9UIF7 546 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 MAGED2Q9UNF1 606 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-210ENST00000635675 PCDHB4Q9Y5E5 795 aa10.32□□□□□ -0.76
LINC00339-210ENST00000635675 DENND4CQ5VZ89 1909 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 HHLA1C9JL84 531 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 PI4K2BG5E9Z4 385 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
LINC00339-210ENST00000635675 TADA3O75528 432 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 CAVIN2O95810 425 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 FAM200BP0CF97 657 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 VDRP11473 427 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 ATP1A3P13637 1013 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 MFAP3P55082 362 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 MAP3K7CLP57077 242 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 PTPN21Q16825 1174 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 FAM78AQ5JUQ0 283 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 STXBP5Q5T5C0 1151 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 CLEC20AQ6ZU45 233 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 NUP93Q8N1F7 819 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 SLC44A3Q8N4M1 653 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 RBBP8NLQ8NC74 664 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-210ENST00000635675 ANKRD20A12PQ8NF67 263 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 ST13P5Q8NFI4 369 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-210ENST00000635675 RSAD2Q8WXG1 361 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 TFAP2BQ92481 460 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 FGF14Q92915 247 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 ASB16Q96NS5 453 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 ZSWIM1Q9BR11 485 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 RPP25Q9BUL9 199 aaKnown RBP10.31□□□□□ -0.76
LINC00339-210ENST00000635675 TRPV4Q9HBA0 871 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 EHD2Q9NZN4 543 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 UXTQ9UBK9 157 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-210ENST00000635675 DNAJC12Q9UKB3 198 aa10.31□□□□□ -0.76
LINC00339-210ENST00000635675 MYH10P35580 1976 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 ZNF638Q14966 1978 aaKnown RBP10.3□□□□□ -0.76
LINC00339-210ENST00000635675 FAM92AA1XBS5 289 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 LGALS16A8MUM7 142 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 BECN2A8MW95 431 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 O00370 1275 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 DCXO43602 365 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 RTN3O95197 1032 aaPredicted RBP10.3□□□□□ -0.76
LINC00339-210ENST00000635675 TPM2P07951 284 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 ALADP13716 330 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 CD19P15391 556 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 NPR3P17342 541 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 FCARP24071 287 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 YWHAQP27348 245 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 WEE1P30291 646 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 CYP4F8P98187 520 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 TDGQ13569 410 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 ARHGAP15Q53QZ3 475 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 GPR158Q5T848 1215 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 KLHDC7AQ5VTJ3 777 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 TANGO2Q6ICL3 276 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 LCLAT1Q6UWP7 414 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 MTSS1LQ765P7 747 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 MON1AQ86VX9 555 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 SCAMP5Q8TAC9 235 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 ZSCAN18Q8TBC5 510 aaPredicted RBP10.3□□□□□ -0.76
LINC00339-210ENST00000635675 SHC3Q92529 594 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 SMARCD2Q92925 531 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 GCNAQ96QF7 691 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 SLC46A2Q9BY10 475 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 UBXN6Q9BZV1 441 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 TASP1Q9H6P5 420 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 CBX8Q9HC52 389 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 PNPLA8Q9NP80 782 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 PLCB1Q9NQ66 1216 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 COMMD8Q9NX08 183 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 ZMYM5Q9UJ78 669 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 AJAP1Q9UKB5 411 aaPredicted RBP10.3□□□□□ -0.76
LINC00339-210ENST00000635675 SORCS3Q9UPU3 1222 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 NUMBLQ9Y6R0 609 aa10.3□□□□□ -0.76
LINC00339-210ENST00000635675 OBSL1O75147 1896 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 MUC3AQ02505 3323 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ZNF840PA6NDX5 716 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 FOXN3O00409 490 aaPredicted RBP10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ECI2O75521 394 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 CALCAP01258 141 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 KRT5P13647 590 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC00339-210ENST00000635675 VIPR2P41587 438 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms