RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 AADACL2Q6P093 401 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 KRT77Q7Z794 578 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CCDC50Q8IVM0 306 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 LRRC52Q8N7C0 313 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 NIPA2Q8N8Q9 360 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 SLC4A11Q8NBS3 891 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TTC8Q8TAM2 541 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 FNIP1Q8TF40 1166 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TFAP2BQ92481 460 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 C18orf8Q96DM3 657 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 HEXIM2Q96MH2 286 aaKnown RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 ZIM3Q96PE6 472 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 DPH5Q9H2P9 285 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 SYNCQ9H7C4 482 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 DNMT3AQ9Y6K1 912 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 GAS8O95995 478 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CD4P01730 458 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 RPLP2P05387 115 aaKnown RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 AKR1A1P14550 325 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CAPN2P17655 700 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 HOXA11P31270 313 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CYP2C19P33261 490 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CRYBB1P53674 252 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CDH8P55286 799 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 EIF3BP55884 814 aaKnown RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 PPP1R7Q15435 360 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 HADHQ16836 314 aaKnown RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 DENND1BQ6P3S1 775 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CROCCP2Q86T23 111 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 SNX27Q96L92 541 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TRIM51Q9BSJ1 452 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 NT5C1AQ9BXI3 368 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TRIM7Q9C029 511 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 SMYD3Q9H7B4 428 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 FAM204AQ9H8W3 233 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 FLRT1Q9NZU1 646 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 GJD2Q9UKL4 321 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 GINS2Q9Y248 185 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 PCDHGB3Q9Y5G1 929 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TCRBV5S1A1TA0A578 114 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 NDC80O14777 642 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 PPP1R12AO14974 1030 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 ADCY6O43306 1168 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 ICMTO60725 284 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 CAND2O75155 1236 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 DUSP11O75319 330 aaKnown RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 TJP3O95049 919 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 KRT3P12035 628 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 ECHS1P30084 290 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 RAP1GAPP47736 663 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 GABRB2P47870 512 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 TM4SF4P48230 202 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 PSMC1P62191 440 aaKnown RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 ADAM17P78536 824 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 CAV1Q03135 178 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 CALCOCO2Q13137 446 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 DSG2Q14126 1118 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 SLMAPQ14BN4 828 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 SIX1Q15475 284 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 TRADDQ15628 312 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 CCNG2Q16589 344 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 FSCN1Q16658 493 aaKnown RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 C2CD6Q53TS8 623 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 MFSD14CQ5VZR4 134 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 TAF2Q6P1X5 1199 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 POLNQ7Z5Q5 900 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 WDTC1Q8N5D0 677 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 C7orf31Q8N865 590 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 BBOF1Q8ND07 529 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 UHMK1Q8TAS1 419 aaKnown RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 DNAJB3Q8WWF6 145 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 MCEEQ96PE7 176 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 OSMRQ99650 979 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 OSBPL8Q9BZF1 889 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 TRIM31Q9BZY9 425 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 SDCBP2Q9H190 292 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 RMI1Q9H9A7 625 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 MEFVO15553 781 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 PPFIA2O75334 1257 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 KATNA1O75449 491 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 MICAL2O94851 1124 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 KRT7P08729 469 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 SETSIPP0DME0 302 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 DESP17661 470 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 ITIH2P19823 946 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 FGFR4P22455 802 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 PTPN7P35236 360 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 HSD17B3P37058 310 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 PNPLA4P41247 253 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 DHX9Q08211 1270 aaKnown RBP7.52□□□□□ -1.21
BRCA1-230ENST00000634433 LCLAT1Q6UWP7 414 aa7.52□□□□□ -1.21
BRCA1-230ENST00000634433 CEP128Q6ZU80 1094 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms