RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 KCTD5Q9NXV2 234 aa2□□□□□ -2.09
TCF4-264ENST00000628391 ABI2Q9NYB9 513 aaPredicted RBP2□□□□□ -2.09
TCF4-264ENST00000628391 MRPL39Q9NYK5 338 aaKnown RBP2□□□□□ -2.09
TCF4-264ENST00000628391 IL37Q9NZH6 218 aa2□□□□□ -2.09
TCF4-264ENST00000628391 TMOD2Q9NZR1 351 aa2□□□□□ -2.09
TCF4-264ENST00000628391 TMEM9Q9P0T7 183 aa2□□□□□ -2.09
TCF4-264ENST00000628391 FRMD4AQ9P2Q2 1039 aaPredicted RBP2□□□□□ -2.09
TCF4-264ENST00000628391 SUCOQ9UBS9 1254 aaKnown RBP2□□□□□ -2.09
TCF4-264ENST00000628391 SLC7A8Q9UHI5 535 aa2□□□□□ -2.09
TCF4-264ENST00000628391 LGALS13Q9UHV8 139 aa2□□□□□ -2.09
TCF4-264ENST00000628391 FBXO2Q9UK22 296 aaPredicted RBP2□□□□□ -2.09
TCF4-264ENST00000628391 GMEB2Q9UKD1 530 aa2□□□□□ -2.09
TCF4-264ENST00000628391 ZBTB21Q9ULJ3 1066 aa2□□□□□ -2.09
TCF4-264ENST00000628391 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2□□□□□ -2.09
TCF4-264ENST00000628391 PHTF1Q9UMS5 762 aa2□□□□□ -2.09
TCF4-264ENST00000628391 VPS4AQ9UN37 437 aa2□□□□□ -2.09
TCF4-264ENST00000628391 SOX13Q9UN79 622 aa2□□□□□ -2.09
TCF4-264ENST00000628391 TFR2Q9UP52 801 aa2□□□□□ -2.09
TCF4-264ENST00000628391 POLHQ9Y253 713 aa2□□□□□ -2.09
TCF4-264ENST00000628391 EIF3LQ9Y262 564 aaKnown RBP2□□□□□ -2.09
TCF4-264ENST00000628391 AMOTL2Q9Y2J4 779 aa2□□□□□ -2.09
TCF4-264ENST00000628391 AP3M1Q9Y2T2 418 aa2□□□□□ -2.09
TCF4-264ENST00000628391 WBP11Q9Y2W2 641 aaKnown RBP2□□□□□ -2.09
TCF4-264ENST00000628391 SLC45A1Q9Y2W3 748 aa2□□□□□ -2.09
TCF4-264ENST00000628391 RTCBQ9Y3I0 505 aaKnown RBP2□□□□□ -2.09
TCF4-264ENST00000628391 NEU2Q9Y3R4 380 aa2□□□□□ -2.09
TCF4-264ENST00000628391 GPSM3Q9Y4H4 160 aa2□□□□□ -2.09
TCF4-264ENST00000628391 DTNAQ9Y4J8 743 aa2□□□□□ -2.09
TCF4-264ENST00000628391 PCDHA13Q9Y5I0 950 aa2□□□□□ -2.09
TCF4-264ENST00000628391 CPQQ9Y646 472 aa2□□□□□ -2.09
TCF4-264ENST00000628391 KDM3BQ7LBC6 1761 aa2□□□□□ -2.09
TCF4-264ENST00000628391 ZNF609O15014 1411 aa2□□□□□ -2.09
TCF4-264ENST00000628391 USP6P35125 1406 aa2□□□□□ -2.09
TCF4-264ENST00000628391 CRB1P82279 1406 aa2□□□□□ -2.09
TCF4-264ENST00000628391 NID2Q14112 1375 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 LRP6O75581 1613 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 ABCB11O95342 1321 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 MN1Q10571 1320 aaPredicted RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 PCDH11YQ9BZA8 1340 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 SIPA1L1O43166 1804 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 TRAV6A0A075B6T7 132 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 C17orf113A0A1B0GUU1 675 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 TLDC2A0PJX2 215 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 FAM47DPA6NHR8 397 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 LRRIQ4A6NIV6 560 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 TSPY2A6NKD2 308 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 TRPC5OSA6NMA1 111 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 CAPN14A8MX76 684 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 A8MX80 341 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 FAM25AB3EWG3 89 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 FAM25CB3EWG5 89 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 FAM25GB3EWG6 89 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 NBPF26B4DH59 902 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 PPP1R3GB7ZBB8 358 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 KLRF2D3W0D1 207 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 PI4K2BG5E9Z4 385 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 H0Y858 1186 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 H0YJX3 145 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 H3BSA7 217 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 TRIM77I1YAP6 450 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 PSMD12O00232 456 aaPredicted RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 ELL2O00472 640 aaPredicted RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 KRIT1O00522 736 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 TNPO2O14787 897 aaKnown RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 PSMA7O14818 248 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 FOXN1O15353 648 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 HDAC3O15379 428 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 ST8SIA5O15466 376 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 PRPF4O43172 522 aaKnown RBP eCLIP1.99□□□□□ -2.09
TCF4-264ENST00000628391 DYNC1LI2O43237 492 aaPredicted RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 DAPK3O43293 454 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 RIPK2O43353 540 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 ASNA1O43681 348 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 DYRK3O43781 588 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 GTPBP6O43824 516 aaPredicted RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 GAS2O43903 313 aaKnown RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 MAN1A2O60476 641 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 SNAP91O60641 907 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 UGT1A9O60656 530 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 KLHL41O60662 606 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 ADAM11O75078 769 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 ADAMTS4O75173 837 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 CDH16O75309 829 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 DEAF1O75398 565 aaPredicted RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 TAF5LO75529 589 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 SURF6O75683 361 aaKnown RBP1.99□□□□□ -2.09
TCF4-264ENST00000628391 TCEA3O75764 348 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 PALMO75781 387 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 SERPINI2O75830 405 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 GABBR2O75899 941 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 KRT37O76014 449 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 USP1O94782 785 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 MYO1DO94832 1006 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 CAMTA2O94983 1202 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 CSPG5O95196 566 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 FTCDO95954 541 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 BMP15O95972 392 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 IL1BP01584 269 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 CD4P01730 458 aa1.99□□□□□ -2.09
TCF4-264ENST00000628391 POLR3DP05423 398 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms