RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SAGE2PA6NJ88 616 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 FCGR1AP12314 374 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PRAMEP78395 509 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PLOD1Q02809 727 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 PTK6Q13882 451 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MFSD14CQ5VZR4 134 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 C4orf33Q8N1A6 199 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KYQ8NBH2 561 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 STK32AQ8WU08 396 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ZNF75CPQ92670 426 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 TNIP3Q96KP6 325 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ECSITQ9BQ95 431 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RIPK2O43353 540 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 HOXA2O43364 376 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 HBP1O60381 514 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PCSK1P29120 753 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TFDP3Q5H9I0 405 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ADCK1Q86TW2 530 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PPHLN1Q8NEY8 458 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 GTF3C2Q8WUA4 911 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 DCUN1D1Q96GG9 259 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PI4K2AQ9BTU6 479 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 C15orf41Q9Y2V0 281 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ANKARQ7Z5J8 1434 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RRN3P2A6NIE6 340 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 M0R3G1 203 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 EPHB6O15197 1021 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SHBGP04278 402 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SPP2Q13103 211 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 USP10Q14694 798 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 SNRNP48Q6IEG0 339 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 FAM160A2Q8N612 972 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 SPIRE2Q8WWL2 714 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 FAM163AQ96GL9 167 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 PRPF18Q99633 342 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 DHX35Q9H5Z1 703 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 KCNH7Q9NS40 1196 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CEMIPQ8WUJ3 1361 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CPS1P31327 1500 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 GAS2O43903 313 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 SERPINB8P50452 374 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PPIDQ08752 370 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 LINC00523Q86TU6 105 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 MCOLN2Q8IZK6 566 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CLEC4FQ8N1N0 589 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RNF149Q8NC42 400 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 GLMNQ92990 594 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 NIF3L1Q9GZT8 377 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SPON1Q9HCB6 807 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KCNK4Q9NYG8 393 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 VPS9D1Q9Y2B5 631 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 LRCH1Q9Y2L9 728 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SPATA31A6Q5VVP1 1343 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TARSP26639 723 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 FAPQ12884 760 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CCDC153Q494R4 210 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PIGWQ7Z7B1 504 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CCDC126Q96EE4 140 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 WNK4Q96J92 1243 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SVILO95425 2214 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 UNC13AQ9UPW8 1703 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 COL15A1P39059 1388 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 ATP6V1G2O95670 118 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CLPTM1O96005 669 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TKTP29401 623 aaKnown RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 CYTH1Q15438 398 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 EFHBQ8N7U6 833 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TBC1D10AQ9BXI6 508 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 DCLK3Q9C098 648 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TRIM45Q9H8W5 580 aaPredicted RBP3.17□□□□□ -1.9
LPP-221ENST00000618621 LRRC4BQ9NT99 713 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 RNF146Q9NTX7 359 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 AHCTF1Q8WYP5 2266 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PI4K2BG5E9Z4 385 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 KCNA3P22001 575 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TMEM119Q4V9L6 283 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 SNX30Q5VWJ9 437 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 UGT3A1Q6NUS8 523 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 FOXR2Q6PJQ5 311 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CCDC103Q8IW40 242 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 DDIASQ8IXT1 998 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 TRAPPC9Q96Q05 1148 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 NUDT12Q9BQG2 462 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.17□□□□□ -1.9
LPP-221ENST00000618621 GTSE1Q9NYZ3 720 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 PCYOX1Q9UHG3 505 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 AP3M1Q9Y2T2 418 aa3.17□□□□□ -1.9
LPP-221ENST00000618621 CEP250Q9BV73 2442 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TRIOBPQ9H2D6 2365 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ATXN2Q99700 1313 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 CCDC195A0A1B0GUA6 201 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PROSCO94903 275 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FGFR2P21802 821 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 GRK2P25098 689 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RRM2P31350 389 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MCL1Q07820 350 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TSTA3Q13630 321 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 IMPG1Q17R60 797 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CLEC16AQ2KHT3 1053 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 BTBD8Q5XKL5 378 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms