RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SIGLEC16A6NMB1 481 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 GYG2O15488 501 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 FAM189A1O60320 539 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 FAAP100Q0VG06 881 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 KPNB1Q14974 876 aaKnown RBP21.33■■□□□ 1.01
NEK3-208ENST00000618534 RCN1Q15293 331 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 HADHQ16836 314 aaKnown RBP21.33■■□□□ 1.01
NEK3-208ENST00000618534 GNPTABQ3T906 1256 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 FAM182AQ5T1J6 154 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 SYCP2LQ5T4T6 812 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 RINLQ6ZS11 566 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 CHSY1Q86X52 802 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 AGBL3Q8NEM8 1001 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 LBHD1Q9BQE6 289 aaPredicted RBP21.33■■□□□ 1.01
NEK3-208ENST00000618534 YIPF3Q9GZM5 350 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 STRIP2Q9ULQ0 834 aa21.33■■□□□ 1.01
NEK3-208ENST00000618534 IQANK1A0A1B0GTG1 560 aa21.33■■□□□ 1
NEK3-208ENST00000618534 TCRBV9S1A1TA0A576 114 aa21.33■■□□□ 1
NEK3-208ENST00000618534 DLDP09622 509 aaKnown RBP21.33■■□□□ 1
NEK3-208ENST00000618534 PYGBP11216 843 aa21.33■■□□□ 1
NEK3-208ENST00000618534 NEFHP12036 1026 aa21.33■■□□□ 1
NEK3-208ENST00000618534 KBTBD12Q3ZCT8 623 aa21.33■■□□□ 1
NEK3-208ENST00000618534 ACSBG2Q5FVE4 666 aa21.33■■□□□ 1
NEK3-208ENST00000618534 TTC7BQ86TV6 843 aa21.33■■□□□ 1
NEK3-208ENST00000618534 THNSL1Q8IYQ7 743 aa21.33■■□□□ 1
NEK3-208ENST00000618534 ARMC2Q8NEN0 867 aa21.33■■□□□ 1
NEK3-208ENST00000618534 TCHPQ9BT92 498 aa21.33■■□□□ 1
NEK3-208ENST00000618534 TMEM134Q9H6X4 195 aa21.33■■□□□ 1
NEK3-208ENST00000618534 STOML1Q9UBI4 398 aa21.33■■□□□ 1
NEK3-208ENST00000618534 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.33■■□□□ 1
NEK3-208ENST00000618534 KBTBD13C9JR72 458 aa21.32■■□□□ 1
NEK3-208ENST00000618534 DNAJC6O75061 913 aa21.32■■□□□ 1
NEK3-208ENST00000618534 KRT36O76013 467 aa21.32■■□□□ 1
NEK3-208ENST00000618534 ATG7O95352 703 aa21.32■■□□□ 1
NEK3-208ENST00000618534 TUBP50607 506 aa21.32■■□□□ 1
NEK3-208ENST00000618534 AP3M2P53677 418 aa21.32■■□□□ 1
NEK3-208ENST00000618534 PSMC1P62191 440 aaKnown RBP21.32■■□□□ 1
NEK3-208ENST00000618534 DPYSL3Q14195 570 aa21.32■■□□□ 1
NEK3-208ENST00000618534 CCDC6Q16204 474 aa21.32■■□□□ 1
NEK3-208ENST00000618534 ZNF333Q96JL9 665 aa21.32■■□□□ 1
NEK3-208ENST00000618534 METTL5Q9NRN9 209 aaKnown RBP21.32■■□□□ 1
NEK3-208ENST00000618534 ZNF214Q9UL59 606 aaPredicted RBP21.32■■□□□ 1
NEK3-208ENST00000618534 MTO1Q9Y2Z2 717 aaKnown RBP21.32■■□□□ 1
NEK3-208ENST00000618534 NVLO15381 856 aaKnown RBP21.31■■□□□ 1
NEK3-208ENST00000618534 ADCY3O60266 1144 aa21.31■■□□□ 1
NEK3-208ENST00000618534 CD19P15391 556 aa21.31■■□□□ 1
NEK3-208ENST00000618534 ASPAP45381 313 aa21.31■■□□□ 1
NEK3-208ENST00000618534 HIRAP54198 1017 aaPredicted RBP21.31■■□□□ 1
NEK3-208ENST00000618534 TRPC3Q13507 836 aa21.31■■□□□ 1
NEK3-208ENST00000618534 SGSM1Q2NKQ1 1148 aa21.31■■□□□ 1
NEK3-208ENST00000618534 SH2D5Q6ZV89 423 aa21.31■■□□□ 1
NEK3-208ENST00000618534 KCTD6Q8NC69 237 aa21.31■■□□□ 1
NEK3-208ENST00000618534 SLC44A1Q8WWI5 657 aa21.31■■□□□ 1
NEK3-208ENST00000618534 TUBB6Q9BUF5 446 aa21.31■■□□□ 1
NEK3-208ENST00000618534 MYOZ2Q9NPC6 264 aa21.31■■□□□ 1
NEK3-208ENST00000618534 IKBKGQ9Y6K9 419 aa21.31■■□□□ 1
NEK3-208ENST00000618534 APOC4-APOC2K7ER74 178 aa21.31■■□□□ 1
NEK3-208ENST00000618534 APOC2P02655 101 aa21.31■■□□□ 1
NEK3-208ENST00000618534 INHBAP08476 426 aa21.31■■□□□ 1
NEK3-208ENST00000618534 RBP3P10745 1247 aa21.31■■□□□ 1
NEK3-208ENST00000618534 TSHRP16473 764 aa21.31■■□□□ 1
NEK3-208ENST00000618534 IRX1P78414 480 aaPredicted RBP21.31■■□□□ 1
NEK3-208ENST00000618534 MRPS35P82673 323 aaKnown RBP21.31■■□□□ 1
NEK3-208ENST00000618534 ZNF200P98182 395 aaPredicted RBP21.31■■□□□ 1
NEK3-208ENST00000618534 SLC18A2Q05940 514 aa21.31■■□□□ 1
NEK3-208ENST00000618534 ZNF699Q32M78 642 aa21.31■■□□□ 1
NEK3-208ENST00000618534 HSPH1Q92598 858 aa21.31■■□□□ 1
NEK3-208ENST00000618534 MCF2LO15068 1137 aa21.3■■□□□ 1
NEK3-208ENST00000618534 TGDSO95455 350 aa21.3■■□□□ 1
NEK3-208ENST00000618534 POLR2BP30876 1174 aaKnown RBP21.3■■□□□ 1
NEK3-208ENST00000618534 VHLP40337 213 aa21.3■■□□□ 1
NEK3-208ENST00000618534 YWHAGP61981 247 aaKnown RBP eCLIP21.3■■□□□ 1
NEK3-208ENST00000618534 TFAMQ00059 246 aaKnown RBP21.3■■□□□ 1
NEK3-208ENST00000618534 DUOXA2Q1HG44 320 aa21.3■■□□□ 1
NEK3-208ENST00000618534 RTKN2Q8IZC4 609 aa21.3■■□□□ 1
NEK3-208ENST00000618534 NRG4Q8WWG1 115 aa21.3■■□□□ 1
NEK3-208ENST00000618534 MCUR1Q96AQ8 359 aa21.3■■□□□ 1
NEK3-208ENST00000618534 CPXM1Q96SM3 734 aa21.3■■□□□ 1
NEK3-208ENST00000618534 TAS2R1Q9NYW7 299 aa21.3■■□□□ 1
NEK3-208ENST00000618534 POLIQ9UNA4 740 aa21.3■■□□□ 1
NEK3-208ENST00000618534 MYL2P10916 166 aa21.3■■□□□ 1
NEK3-208ENST00000618534 RXRBP28702 533 aa21.3■■□□□ 1
NEK3-208ENST00000618534 RAP1GAPP47736 663 aa21.3■■□□□ 1
NEK3-208ENST00000618534 YWHAEP62258 255 aaKnown RBP21.3■■□□□ 1
NEK3-208ENST00000618534 TMEM132BQ14DG7 1078 aa21.3■■□□□ 1
NEK3-208ENST00000618534 NPNTQ6UXI9 565 aa21.3■■□□□ 1
NEK3-208ENST00000618534 VPS52Q8N1B4 723 aa21.3■■□□□ 1
NEK3-208ENST00000618534 SPATA18Q8TC71 538 aa21.3■■□□□ 1
NEK3-208ENST00000618534 WDR60Q8WVS4 1066 aa21.3■■□□□ 1
NEK3-208ENST00000618534 CALN1Q9BXU9 219 aa21.3■■□□□ 1
NEK3-208ENST00000618534 CNTN3Q9P232 1028 aa21.3■■□□□ 1
NEK3-208ENST00000618534 RLFQ13129 1914 aa21.3■■□□□ 1
NEK3-208ENST00000618534 E5RJQ4 531 aa21.29■■□□□ 1
NEK3-208ENST00000618534 SMAPO00193 183 aa21.29■■□□□ 1
NEK3-208ENST00000618534 PPP1R12AO14974 1030 aaPredicted RBP21.29■■□□□ 1
NEK3-208ENST00000618534 EGFRP00533 1210 aa21.29■■□□□ 1
NEK3-208ENST00000618534 GRM1Q13255 1194 aa21.29■■□□□ 1
NEK3-208ENST00000618534 SNX30Q5VWJ9 437 aa21.29■■□□□ 1
NEK3-208ENST00000618534 ZPBP2Q6X784 338 aa21.29■■□□□ 1
NEK3-208ENST00000618534 SCYL3Q8IZE3 742 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms