RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ITGA7Q13683 1181 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 FBXO11Q86XK2 927 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 EPS8L3Q8TE67 593 aaKnown RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ATXN2LQ8WWM7 1075 aaKnown RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 CAVIN3Q969G5 261 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 TMED5Q9Y3A6 229 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 A0A1B0GTH6 734 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 LOC110117498-PIK3R3F6TDL0 507 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 NR3C1P04150 777 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 PSAPP07602 524 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 PDPK2PQ6A1A2 396 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 PI16Q6UXB8 463 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 CYP4Z1Q86W10 505 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ZBTB8BQ8NAP8 495 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 PLCH2O75038 1416 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 SLCO1B7G3V0H7 640 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 H3BQF6 201 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 MDM4O15151 490 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 SMAD1Q15797 465 aaKnown RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 DGKHQ86XP1 1220 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 UTP15Q8TED0 518 aaKnown RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 KCNB2Q92953 911 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 LDLRP01130 860 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 CRKP46108 304 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ZNF544Q6NX49 715 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 SLC9A7Q96T83 725 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ADGRL1O94910 1474 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 SUPT3HB4E1H0 165 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 H3BNX3 289 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 GNA15P30679 374 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 RXRGP48443 463 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ARHGDIBP52566 201 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ITGA8P53708 1063 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 CDH6P55285 790 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 NET1Q7Z628 596 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 MYH13Q9UKX3 1938 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 TFECO14948 347 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 POU1F1P28069 291 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ARF3P61204 181 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ARF1P84077 181 aaKnown RBP15.53■□□□□ 0.08
COL5A1-208ENST00000618395 SCARA5Q6ZMJ2 495 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 GPD1LQ8N335 351 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 PSMD3O43242 534 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 TIMM44O43615 452 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 FYNP06241 537 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 TSPAN19P0C672 248 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 DLG1Q12959 904 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 KIZQ2M2Z5 673 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 TMEM270Q6UE05 265 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 ENOSF1Q7L5Y1 443 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 TBCKQ8TEA7 893 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 MYH7BA7E2Y1 1941 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 SSU72P8A0A1W2PR75 194 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 PGK2P07205 417 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 CHRNDQ07001 517 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 FAM83EQ2M2I3 478 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 CHSY1Q86X52 802 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 TGFBRAP1Q8WUH2 860 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 AFF4Q9UHB7 1163 aaKnown RBP15.52■□□□□ 0.08
COL5A1-208ENST00000618395 GTF2A1LQ9UNN4 478 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 PMF1-BGLAPU3KQ54 211 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 GSTM1P09488 218 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 STAP2Q9UGK3 403 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 KHDRBS3O75525 346 aaKnown RBP15.52■□□□□ 0.08
COL5A1-208ENST00000618395 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 ZYXQ15942 572 aaKnown RBP15.52■□□□□ 0.08
COL5A1-208ENST00000618395 KRT24Q2M2I5 525 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 CACHD1Q5VU97 1274 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 NLRP10Q86W26 655 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 C8orf59Q8N0T1 100 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-208ENST00000618395 PPP1R2P1Q96PQ5 205 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 FAM193BQ96PV7 902 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-208ENST00000618395 WHRNQ9P202 907 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 ABCC4O15439 1325 aa15.52■□□□□ 0.08
COL5A1-208ENST00000618395 ATP9BO43861 1147 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 SNAP91O60641 907 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.07
COL5A1-208ENST00000618395 POLA2Q14181 598 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 ZHX1-C8orf76Q96EF9 292 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 SLITRK2Q9H156 845 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 PCDHA1Q9Y5I3 950 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 ABCC1P33527 1531 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 PARNO95453 639 aaKnown RBP15.52■□□□□ 0.07
COL5A1-208ENST00000618395 DHFRP00374 187 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 MACC1Q6ZN28 852 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 TRAPPC11Q7Z392 1133 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 RAB43Q86YS6 212 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 LRRC71Q8N4P6 559 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 DENND6BQ8NEG7 585 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 PYDC1Q8WXC3 89 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 SLC5A4Q9NY91 659 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 DUSP12Q9UNI6 340 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 CLDN3O15551 220 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 KPNA6O60684 536 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 SCGNO76038 276 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 EDRF1Q3B7T1 1238 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 CAMK1DQ8IU85 385 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 AP1S3Q96PC3 154 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms