RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RREB1Q92766 1687 aa13.75□□□□□ -0.21
MSH6-214ENST00000616033 MYPNQ86TC9 1320 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ALOX15BO15296 676 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 CD48P09326 243 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 IMPDH2P12268 514 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 GMPRP36959 345 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 DNAJC24Q6P3W2 148 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 SPOCD1Q6ZMY3 1216 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 UNC45BQ8IWX7 931 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ALLCQ8N6M5 410 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 SLITRK1Q96PX8 696 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 SRPK1Q96SB4 655 aaKnown RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 GAKO14976 1311 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ABLIM1O14639 778 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 TMEM63AO94886 807 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 HLA-DRAP01903 254 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 CD19P15391 556 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 CRKP46108 304 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 LMNB2Q03252 620 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 RNASEH2BQ5TBB1 312 aaKnown RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 MARK2Q7KZI7 788 aaKnown RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 IFT122Q9HBG6 1241 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ARHGEF38Q9NXL2 777 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 ATP8B3O60423 1300 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 CLRN2A0PK11 232 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 TCP10L2B9ZVM9 353 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 TRAFD1O14545 582 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 PROCP04070 461 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 WEE2P0C1S8 567 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 IL1R1P14778 569 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ITGB5P18084 799 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 CHRNA5P30532 468 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 NT5C2P49902 561 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 GALK1P51570 392 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 HIC1Q14526 733 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 SLC15A2Q16348 729 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 TMPRSS6Q8IU80 811 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 BANPQ8N9N5 519 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 FEZF2Q8TBJ5 459 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ZFAND2BQ8WV99 257 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 ZNF668Q96K58 619 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 ZBTB45Q96K62 511 aaPredicted RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 MRPL47Q9HD33 250 aaKnown RBP13.74□□□□□ -0.21
MSH6-214ENST00000616033 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
MSH6-214ENST00000616033 DNAJC6O75061 913 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 F7P08709 466 aaPredicted RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 NOVP48745 357 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 PDE1BQ01064 536 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 DMP1Q13316 513 aaPredicted RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 OR6Y1Q8NGX8 325 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 EXD1Q8NHP7 514 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 GDPD5Q8WTR4 605 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 CPT1BQ92523 772 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 IFT43Q96FT9 208 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 CNBD2Q96M20 576 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 GRIP2Q9C0E4 1043 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 TBX20Q9UMR3 447 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 MYH9P35579 1960 aaKnown RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 CAPN8A6NHC0 703 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 ABHD2P08910 425 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 CIITAP33076 1130 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 RPL22P35268 128 aaKnown RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 NPTX2P47972 431 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 VCPP55072 806 aaKnown RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 WNT7BP56706 349 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 MAP7Q14244 749 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 MORF4L2Q15014 288 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 TAF5Q15542 800 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 CDO1Q16878 200 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 E2F7Q96AV8 911 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 SLC24A2Q9UI40 661 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 IQANK1A0A1B0GTG1 560 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 SPDYE16A6NNV3 312 aaPredicted RBP13.73□□□□□ -0.21
MSH6-214ENST00000616033 CFLARO15519 480 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 GRIA2P42262 883 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 SLC9A9Q8IVB4 645 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 TMOD2Q9NZR1 351 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 PI4KBQ9UBF8 816 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
MSH6-214ENST00000616033 BOLA2-SMG1P6H3BVE0 249 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 H7C0C1 242 aa13.72□□□□□ -0.21
MSH6-214ENST00000616033 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
MSH6-214ENST00000616033 PEX1O43933 1283 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms