RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GLRA4Q5JXX5 417 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CXCL17Q6UXB2 119 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 BSNDQ8WZ55 320 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 PTPRN2Q92932 1015 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CAPS2Q9BXY5 557 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 INTS13Q9NVM9 706 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 PSD3Q9NYI0 1048 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 STX18Q9P2W9 335 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 SLC39A10Q9ULF5 831 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TOPAZ1Q8N9V7 1692 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZNF500O60304 480 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ITIH2P19823 946 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 HMOX2P30519 316 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 SLC12A1Q13621 1099 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 PKD2L2Q9NZM6 624 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 DNMT3LQ9UJW3 386 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 FGF10O15520 208 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 SYF2O95926 243 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 CNTN2Q02246 1040 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TP53BP2Q13625 1128 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 HIF1AQ16665 826 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TRIM59Q8IWR1 403 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ASPSCR1Q9BZE9 553 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 AFF4Q9UHB7 1163 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 MRPS23Q9Y3D9 190 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 PTCH2Q9Y6C5 1203 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 MAGEC1O60732 1142 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 CYP3A5P20815 502 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 CES1P23141 567 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 GCKP35557 465 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 RARRES1P49788 294 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TKTL1P51854 596 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZNF268Q14587 947 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TREML2Q5T2D2 321 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ANKS6Q68DC2 871 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TOP6BLQ8N6T0 577 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 GOLPH3Q9H4A6 298 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TXLNGQ9NUQ3 528 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZFATQ9P243 1243 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TBC1D14Q9P2M4 693 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 C2CD2Q9Y426 696 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 LGR5O75473 907 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 GRM5P41594 1212 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ARSEP51690 589 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 SULT2A1Q06520 285 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 RCN2Q14257 317 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 IZUMO3Q5VZ72 239 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ACOT1Q86TX2 421 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 CXorf38Q8TB03 319 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 ERGIC2Q96RQ1 377 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 AP1M1Q9BXS5 423 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMEM117Q9H0C3 514 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 LNPEPQ9UIQ6 1025 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 L3MBTL1Q9Y468 752 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 FRMD3A2A2Y4 597 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 PDE2AO00408 941 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 IFRD1O00458 451 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 DTNBO60941 627 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 GZMAP12544 262 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 PTGER2P43116 358 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 PKN3Q6P5Z2 889 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 CCDC137Q6PK04 289 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 LEMD2Q8NC56 503 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 SLC35G2Q8TBE7 412 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 VCPIP1Q96JH7 1222 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 CNPY3Q9BT09 278 aa10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 APOBEC2Q9Y235 224 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-204ENST00000615230 FAM95CA0A1B0GW59 222 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 RBAK-RBAKDNI3L0D1 243 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 SUPT3HO75486 399 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 BMP10O95393 424 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 ERVK-10P10266 1014 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 MAPK1P28482 360 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 EPHB2P29323 1055 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 SPRP35270 261 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 PDIA2Q13087 525 aaKnown RBP10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 CEP68Q76N32 757 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 SNX31Q8N9S9 440 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 HPS3Q969F9 1004 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 FGD4Q96M96 766 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 YY1AP1Q9H869 796 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 ENC1O14682 589 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 MTA2O94776 668 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 EIF4BP23588 611 aaKnown RBP10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 MCL1Q07820 350 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 PSMD5Q16401 504 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 SLC39A12Q504Y0 691 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 LBX2Q6XYB7 198 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 LRRC49Q8IUZ0 686 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 DCLK2Q8N568 766 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 PLIN4Q96Q06 1357 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 VPS11Q9H270 941 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 GTSE1Q9NYZ3 720 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 DCTN3O75935 186 aa10.12□□□□□ -0.79
TNFRSF9-204ENST00000615230 CD2BP2O95400 341 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms