RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SYNPOQ8N3V7 929 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 HINFPQ9BQA5 517 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 EBF3Q9H4W6 596 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 HPS4Q9NQG7 708 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 RBM12Q9NTZ6 932 aaKnown RBP24.21■■□□□ 1.47
FAM228B-208ENST00000613899 TRPM5Q9NZQ8 1165 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 OTOGLQ3ZCN5 2332 aa24.21■■□□□ 1.47
FAM228B-208ENST00000613899 IKBKBO14920 756 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 LILRB5O75023 590 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 VNN1O95497 513 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 TDGF1P13385 188 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 NR2F2P24468 414 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 CXCL12P48061 93 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 PPP3CCP48454 512 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 DLG4P78352 724 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 CCINQ13939 588 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 ZNF77Q15935 545 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 SGSM1Q2NKQ1 1148 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 TRIM68Q6AZZ1 485 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 SCARA5Q6ZMJ2 495 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 GUF1Q8N442 669 aaKnown RBP24.2■■□□□ 1.46
FAM228B-208ENST00000613899 ARL14EPQ8N8R7 260 aaPredicted RBP24.2■■□□□ 1.46
FAM228B-208ENST00000613899 SUMF1Q8NBK3 374 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 RIN3Q8TB24 985 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 RUBCNQ92622 972 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 TAF4BQ92750 862 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 TNIP3Q96KP6 325 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 SLC22A12Q96S37 553 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 GDPD2Q9HCC8 539 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 GCNT4Q9P109 453 aa24.2■■□□□ 1.46
FAM228B-208ENST00000613899 C2orf78A6NCI8 922 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 TCF3P15923 654 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 USP46P62068 366 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 GAS6Q14393 721 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 CYP2S1Q96SQ9 504 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 ZNF518BQ9C0D4 1074 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 EPC1Q9H2F5 836 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 ARHGAP26Q9UNA1 814 aa24.19■■□□□ 1.46
FAM228B-208ENST00000613899 ZNF292O60281 2723 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 PAPSS2O95340 614 aaPredicted RBP24.18■■□□□ 1.46
FAM228B-208ENST00000613899 HDCP19113 662 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 RPL13P26373 211 aaKnown RBP24.18■■□□□ 1.46
FAM228B-208ENST00000613899 PIK3CAP42336 1068 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 RAP1GAPP47736 663 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 VAMP7P51809 220 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 CDH8P55286 799 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 SATB1Q01826 763 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 WDR44Q5JSH3 913 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 Q6ZS52 159 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 INTS8Q75QN2 995 aaKnown RBP24.18■■□□□ 1.46
FAM228B-208ENST00000613899 SV2AQ7L0J3 742 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 CPA6Q8N4T0 437 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 OSCP1Q8WVF1 389 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 ATP2A3Q93084 1043 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 EXOC4Q96A65 974 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 SLITRK1Q96PX8 696 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 B3GNT5Q9BYG0 378 aa24.18■■□□□ 1.46
FAM228B-208ENST00000613899 DUS2Q9NX74 493 aaKnown RBP24.18■■□□□ 1.46
FAM228B-208ENST00000613899 ARSAP15289 507 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 IFNAR2P48551 515 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 ENPEPQ07075 957 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 GRSF1Q12849 480 aaKnown RBP eCLIP24.17■■□□□ 1.46
FAM228B-208ENST00000613899 FAM35AQ86V20 835 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 TTC16Q8NEE8 873 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 SH3RF2Q8TEC5 729 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 IMPG2Q9BZV3 1241 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 MAPK8IP1Q9UQF2 711 aa24.17■■□□□ 1.46
FAM228B-208ENST00000613899 CLDN5O00501 218 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 TRDMT1O14717 391 aaKnown RBP24.16■■□□□ 1.46
FAM228B-208ENST00000613899 RTN3O95197 1032 aaPredicted RBP24.16■■□□□ 1.46
FAM228B-208ENST00000613899 ASS1P00966 412 aaKnown RBP24.16■■□□□ 1.46
FAM228B-208ENST00000613899 KRT13P13646 458 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 CACNA2D1P54289 1103 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 NUCB2P80303 420 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 TMEM196Q5HYL7 178 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 SMARCD1Q96GM5 515 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 MED10Q9BTT4 135 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 SDCBP2Q9H190 292 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 TMEM30AQ9NV96 361 aa24.16■■□□□ 1.46
FAM228B-208ENST00000613899 SMG5Q9UPR3 1016 aaKnown RBP24.16■■□□□ 1.46
FAM228B-208ENST00000613899 SPTBN4Q9H254 2564 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 ZNF840PA6NDX5 716 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 GOLGA6L4A6NEF3 574 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 OTOL1A6NHN0 477 aaPredicted RBP24.15■■□□□ 1.46
FAM228B-208ENST00000613899 AKAP3O75969 853 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 HLA-DRAP01903 254 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 TRIM21P19474 475 aaKnown RBP24.15■■□□□ 1.46
FAM228B-208ENST00000613899 PSMC2P35998 433 aaKnown RBP24.15■■□□□ 1.46
FAM228B-208ENST00000613899 C1orf220Q5T0J3 134 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 FAM186BQ8IYM0 893 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 NUP93Q8N1F7 819 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 PDZD8Q8NEN9 1154 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 SECISBP2LQ93073 1101 aaKnown RBP24.15■■□□□ 1.46
FAM228B-208ENST00000613899 ECT2Q9H8V3 914 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 DMAP1Q9NPF5 467 aaPredicted RBP24.15■■□□□ 1.46
FAM228B-208ENST00000613899 NCDNQ9UBB6 729 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 WNT6Q9Y6F9 365 aa24.15■■□□□ 1.46
FAM228B-208ENST00000613899 IFRD2Q12894 506 aaPredicted RBP24.14■■□□□ 1.45
FAM228B-208ENST00000613899 TAF10Q12962 218 aa24.14■■□□□ 1.45
FAM228B-208ENST00000613899 ADAM9Q13443 819 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms