RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NCALDP61601 193 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 SFSWAPQ12872 951 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 ZNF484Q5JVG2 852 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 STYK1Q6J9G0 422 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 HES6Q96HZ4 224 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 NFIBO00712 420 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CYTH3O43739 400 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 ATP5BP06576 529 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 PAPD7Q5XG87 772 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 IYDQ6PHW0 289 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 KDELC2Q7Z4H8 507 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 ADCK2Q7Z695 626 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 MICALL2Q8IY33 904 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 SH3GL1Q99961 368 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 GANQ9H2C0 597 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 SDR42E2A6NKP2 422 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 OGTO15294 1046 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CYP2C9P11712 490 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 C4BPBP20851 252 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 SCTRP47872 440 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 BTKQ06187 659 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CNTN1Q12860 1018 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 TDRD10Q5VZ19 366 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 IFNEQ86WN2 208 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 CELF4Q9BZC1 486 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 LRRC40Q9H9A6 602 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 KCNH7Q9NS40 1196 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 RAD54BQ9Y620 910 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 TM9SF1O15321 606 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 STX7O15400 261 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 NOA1Q8NC60 698 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 ELP3Q9H9T3 547 aa18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGXB3-206ENST00000613459 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 PGK2P07205 417 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 NAMPTP43490 491 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 NUDT2P50583 147 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 SYCP2LQ5T4T6 812 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 NAIF1Q69YI7 327 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 RAET1EQ8TD07 263 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 DIS3LQ8TF46 1054 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 CRLS1Q9UJA2 301 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 H3BQF6 201 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 H7C4K7 107 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 DYNC1LI2O43237 492 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 EGFRP00533 1210 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 SLC11A2P49281 568 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 ARL4DP49703 201 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 TFDP3Q5H9I0 405 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 STK25O00506 426 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 CHRM3P20309 590 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 TGM2P21980 687 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 TRIP4Q15650 581 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 PCSK7Q16549 785 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 ARHGAP15Q53QZ3 475 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 ZRANB3Q5FWF4 1079 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 ARID3BQ8IVW6 561 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 REXO1L1PQ8IX06 675 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 ZNF786Q8N393 782 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 SLC25A41Q8N5S1 370 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 SRPK1Q96SB4 655 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 ADAM33Q9BZ11 813 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 VPS26AO75436 327 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 RBP1P09455 135 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 PSMC3P17980 439 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 PRKAA2P54646 552 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 PURAQ00577 322 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 PLA2G4FQ68DD2 849 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 WWOXQ9NZC7 414 aa18.03■□□□□ 0.48
HMGXB3-206ENST00000613459 CALB2P22676 271 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 KCNB2Q92953 911 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 MRPL48Q96GC5 212 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 BBS2Q9BXC9 721 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 ZFYVE28Q9HCC9 887 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 FAM49BQ9NUQ9 324 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 PRRG1O14668 218 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 AP5Z1O43299 807 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 FKBP6O75344 327 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 DGKIO75912 1065 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 IFNA14P01570 189 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 ICAM1P05362 532 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 PON1P27169 355 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 ATXN3P54252 364 aaPredicted RBP18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 TWF1Q12792 350 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 DENND1BQ6P3S1 775 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 POLE3Q9NRF9 147 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 RHBDL2Q9NX52 303 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 CTNNAL1Q9UBT7 734 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 SERPIND1P05546 499 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 NCAM1P13591 858 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 ETFBP38117 255 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 SCUBE1Q8IWY4 988 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 EXD1Q8NHP7 514 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 CYP3A43Q9HB55 503 aa18.02■□□□□ 0.48
HMGXB3-206ENST00000613459 MLNP12872 115 aa18.02■□□□□ 0.47
HMGXB3-206ENST00000613459 SIKE1Q9BRV8 207 aa18.02■□□□□ 0.47
HMGXB3-206ENST00000613459 KLHL4Q9C0H6 718 aa18.02■□□□□ 0.47
HMGXB3-206ENST00000613459 DPP3Q9NY33 737 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms