RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ATP8A2Q9NTI2 1148 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ZSCAN5CA6NGD5 496 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 C2orf74A8MZ97 194 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 NPEPPSP55786 919 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TNFAIP1Q13829 316 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RIPOR1Q6ZS17 1223 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TTC13Q8NBP0 860 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TINF2Q9BSI4 451 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ZSCAN5AQ9BUG6 496 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 C2orf49Q9BVC5 232 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ABCG2Q9UNQ0 655 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TPRKBQ9Y3C4 175 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PCDHB13Q9Y5F0 798 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PVALEFA0A1B0GWK0 134 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TK2O00142 265 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 AHI1Q8N157 1196 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 OR7A2PQ8NGA2 310 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 HM13Q8TCT9 377 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 AFG1LQ8WV93 481 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 WRNIP1Q96S55 665 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MAGEC1O60732 1142 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 NOL4O94818 638 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CLUP10909 449 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 HLA-DPA1P20036 260 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PDIA2Q13087 525 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 BFSP2Q13515 415 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TP53BP2Q13625 1128 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PYHIN1Q6K0P9 492 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 LAYNQ6UX15 382 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 BNC2Q6ZN30 1099 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MON2Q7Z3U7 1717 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ENGASEQ8NFI3 743 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 LINS1Q8NG48 757 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 LMTK3Q96Q04 1460 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RMDN3Q96TC7 470 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 BDH2Q9BUT1 245 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CINPQ9BW66 212 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PADI4Q9UM07 663 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ADRA2BP18089 450 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RELAQ04206 551 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 POLNQ7Z5Q5 900 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 HACE1Q8IYU2 909 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 VANGL1Q8TAA9 524 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SSH3Q8TE77 659 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CHP1Q99653 195 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CCNT1O60563 726 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ATF7P17544 494 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MSH3P20585 1137 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CCND2P30279 289 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 YWHABP31946 246 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GPS1Q13098 491 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 COG2Q14746 738 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PDZK1Q5T2W1 519 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 LRRC17Q8N6Y2 441 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KBTBD3Q8NAB2 608 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RAB2BQ8WUD1 216 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CDK19Q9BWU1 502 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 H6PDO95479 791 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 NPR3P17342 541 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GRK3P35626 688 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 IFI35P80217 286 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 QPRTQ15274 297 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TPTE2Q6XPS3 522 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KBTBD8Q8NFY9 601 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CUEDC1Q9NWM3 386 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GSC2O15499 205 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SARSP49591 514 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 BLOC1S5Q8TDH9 187 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TBC1D14Q9P2M4 693 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PFDN2Q9UHV9 154 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SPATA2Q9UM82 520 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ATP2B4P23634 1241 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SLC18A3Q16572 532 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KLHL35Q6PF15 583 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 HAUS6Q7Z4H7 955 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RASAL3Q86YV0 1011 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CXorf21Q9HAI6 301 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SMARCAL1Q9NZC9 954 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SLC24A2Q9UI40 661 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 POLIQ9UNA4 740 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GPR75-ASB3A0A0A6YYF3 556 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TMCC2O75069 709 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RPL22P35268 128 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 NSUN2Q08J23 767 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ABCB5Q2M3G0 1257 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 EAPPQ56P03 285 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 BICRALQ6AI39 1079 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GALNT18Q6P9A2 607 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CREG2Q8IUH2 290 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SAMD14Q8IZD0 417 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 UCMAQ8WVF2 138 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ASB3Q9Y575 518 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 EMILIN1Q9Y6C2 1016 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 IQSEC2Q5JU85 1478 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CRTAPO75718 401 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF200P98182 395 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PPM1LQ5SGD2 360 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 TTBK2Q6IQ55 1244 aa5.12□□□□□ -1.59
VPS13D-213ENST00000613099 PRMT9Q6P2P2 845 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms