RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TBC1D4O60343 1298 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 GJB6O95452 261 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 LCP1P13796 627 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 MAMLD1Q13495 774 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 TPCN2Q8NHX9 752 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 TMEM30AQ9NV96 361 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 MTRRQ9UBK8 725 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 MTUS1Q9ULD2 1270 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 PCDHB5Q9Y5E4 795 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 PALMO75781 387 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 CYP2F1P24903 491 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 CA8P35219 290 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 BMPR1AP36894 532 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 OR6B2Q6IFH4 312 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 PLEKHA7Q6IQ23 1121 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 TMEM110Q86TL2 294 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 SCUBE3Q8IX30 993 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 C3orf20Q8ND61 904 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 AUTS2Q8WXX7 1259 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
SREK1-216ENST00000612404 WDR35Q9P2L0 1181 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 BACE2Q9Y5Z0 518 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 NLRC5Q86WI3 1866 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 TUBB4AP04350 444 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 OR1D2P34982 312 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 GRIK1P39086 918 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 ACADSBP45954 432 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 ZNF268Q14587 947 aaPredicted RBP18.49■□□□□ 0.55
SREK1-216ENST00000612404 DAAM2Q86T65 1068 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 HSFY1Q96LI6 401 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 GDF15Q99988 308 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 C17orf80Q9BSJ5 609 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 SELENOOQ9BVL4 669 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 MRPL17Q9NRX2 175 aaKnown RBP18.49■□□□□ 0.55
SREK1-216ENST00000612404 STK39Q9UEW8 545 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 ANAPC7Q9UJX3 599 aa18.49■□□□□ 0.55
SREK1-216ENST00000612404 GRID2IPA4D2P6 1211 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 TMEM110-MUSTN1A8MSY1 372 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 ADAM12O43184 909 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 CA3P07451 260 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 CASQ1P31415 396 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 GPR17Q13304 367 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 TCEAL1Q15170 157 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 CFAP221Q4G0U5 840 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 FAM102AQ5T9C2 384 aaPredicted RBP18.48■□□□□ 0.55
SREK1-216ENST00000612404 DCUN1D2Q6PH85 259 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 RNF19BQ6ZMZ0 732 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 FAM183BPQ6ZVS7 135 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 SCN4BQ8IWT1 228 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 ATAD1Q8NBU5 361 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 ZMIZ2Q8NF64 920 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 FUBP3Q96I24 572 aaKnown RBP eCLIP18.48■□□□□ 0.55
SREK1-216ENST00000612404 BTBD6Q96KE9 485 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 MCEEQ96PE7 176 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 GOLPH3Q9H4A6 298 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 LRRC4Q9HBW1 653 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 CSNK1G1Q9HCP0 422 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 ALG13Q9NP73 1137 aaKnown RBP18.48■□□□□ 0.55
SREK1-216ENST00000612404 RWDD3Q9Y3V2 267 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 PCDHGC5Q9Y5F6 944 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 PTPRDP23468 1912 aa18.48■□□□□ 0.55
SREK1-216ENST00000612404 F8VP50 259 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 BUB1BO60566 1050 aaPredicted RBP18.47■□□□□ 0.55
SREK1-216ENST00000612404 GABBR2O75899 941 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 MTA2O94776 668 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 ADIGQ0VDE8 80 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 SLC8B1Q6J4K2 584 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 SPRED2Q7Z698 418 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 MCRS1Q96EZ8 462 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 TRIM7Q9C029 511 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 CYLDQ9NQC7 956 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 ARHGEF15O94989 841 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 CSPG5O95196 566 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 KRT3P12035 628 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 HADHBP55084 474 aaKnown RBP18.47■□□□□ 0.55
SREK1-216ENST00000612404 RPL7AP62424 266 aaKnown RBP18.47■□□□□ 0.55
SREK1-216ENST00000612404 ROR1Q01973 937 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 MESDQ14696 234 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 PTPROQ16827 1216 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 SIX6OS1Q8N1H7 587 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 FEZF2Q8TBJ5 459 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 KCTD13Q8WZ19 329 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 CALR3Q96L12 384 aaKnown RBP18.47■□□□□ 0.55
SREK1-216ENST00000612404 CLSTN3Q9BQT9 956 aa18.47■□□□□ 0.55
SREK1-216ENST00000612404 METTL5Q9NRN9 209 aaKnown RBP18.47■□□□□ 0.55
SREK1-216ENST00000612404 TCRBV5S1A1TA0A578 114 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 MTMR11A4FU01 709 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 PAPSS1O43252 624 aaPredicted RBP18.46■□□□□ 0.55
SREK1-216ENST00000612404 CAPN15O75808 1086 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 FTCDO95954 541 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 RPL34P49207 117 aaKnown RBP18.46■□□□□ 0.55
SREK1-216ENST00000612404 GSCP56915 257 aaPredicted RBP18.46■□□□□ 0.55
SREK1-216ENST00000612404 RNASE9P60153 205 aaKnown RBP18.46■□□□□ 0.55
SREK1-216ENST00000612404 SMARCB1Q12824 385 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 GPRIN1Q7Z2K8 1008 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 LRRC57Q8N9N7 239 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 GBF1Q92538 1859 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 PIWIL1Q96J94 861 aaKnown RBP18.46■□□□□ 0.55
SREK1-216ENST00000612404 ZBP1Q9H171 429 aa18.46■□□□□ 0.55
SREK1-216ENST00000612404 PLXNA4Q9HCM2 1894 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms