RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 HP1BP3Q5SSJ5 553 aaPredicted RBP19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 LLGL2Q6P1M3 1020 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 CAPN12Q6ZSI9 719 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 TMEM161BQ8NDZ6 487 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 TRIM55Q9BYV6 548 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 FETUBQ9UGM5 382 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 KCNG1Q9UIX4 513 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 DNPEPQ9ULA0 475 aa19.99■□□□□ 0.79
SEMA3B-210ENST00000611067 DENND3A2RUS2 1198 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 CFAP69A5D8W1 941 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 MAGEA13PA6NCF6 341 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 DNAJC6O75061 913 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 TBX10O75333 385 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 CD58P19256 250 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 CETN2P41208 172 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 ARSEP51690 589 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 GEMIN4P57678 1058 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 AP1B1Q10567 949 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 SEPT7Q16181 437 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 CENPUQ71F23 418 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 MON1BQ7L1V2 547 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 PLEKHH3Q7Z736 793 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 ZNF467Q7Z7K2 595 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 ALLCQ8N6M5 410 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 PPFIBP2Q8ND30 876 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 BSNDQ8WZ55 320 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 NTPCRQ9BSD7 190 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 KIFC3Q9BVG8 833 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 VPS11Q9H270 941 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 VTA1Q9NP79 307 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 PDGFCQ9NRA1 345 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 HEY2Q9UBP5 337 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 TBX20Q9UMR3 447 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 ZNF148Q9UQR1 794 aa19.98■□□□□ 0.79
SEMA3B-210ENST00000611067 H0YCG3 227 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 TM9SF1O15321 606 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 CYP1A1P04798 512 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 ZSCAN5DPP0CG00 497 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 GTF2H1P32780 548 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 NFX1Q12986 1120 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 GPS1Q13098 491 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 GRB14Q14449 540 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 RGMBQ6NW40 437 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 ZC3H18Q86VM9 953 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 TMC2Q8TDI7 906 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 GATA6Q92908 595 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 MCUR1Q96AQ8 359 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 MRRFQ96E11 262 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 DHX33Q9H6R0 707 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 ZNF212Q9UDV6 495 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 PCDHB2Q9Y5E7 798 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 NDC80O14777 642 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 TJP3O95049 919 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 ABCD1P33897 745 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 C2CD6Q53TS8 623 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 RNASEH2BQ5TBB1 312 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 SAPCD2Q86UD0 394 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 MAP4K3Q8IVH8 894 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 PHC3Q8NDX5 983 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 TRIM4Q9C037 500 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 TOPORSQ9NS56 1045 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 SHOC2Q9UQ13 582 aa19.97■□□□□ 0.79
SEMA3B-210ENST00000611067 A0A0G2JND7 137 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 OVGP1Q12889 678 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 LIN9Q5TKA1 542 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 FOXB2Q5VYV0 432 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 SV2AQ7L0J3 742 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 VPS52Q8N1B4 723 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 COPS5Q92905 334 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 STMN2Q93045 179 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 SKA1Q96BD8 255 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 ELMO3Q96BJ8 720 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 ADAM33Q9BZ11 813 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 MANSC1Q9H8J5 431 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 MRPL47Q9HD33 250 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 CPA4Q9UI42 421 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 WDR91A4D1P6 747 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 GJC1P36383 396 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 PIK3CAP42336 1068 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 ARFIP2P53365 341 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 CACNA2D1P54289 1103 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 PDIA2Q13087 525 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 KRT72Q14CN4 511 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 TAF1CQ15572 869 aaPredicted RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 TCP10LQ8TDR4 215 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 ALKBH8Q96BT7 664 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 METTL5Q9NRN9 209 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 RABGEF1Q9UJ41 708 aa19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 DRG1Q9Y295 367 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 MTO1Q9Y2Z2 717 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-210ENST00000611067 A8MXQ7 604 aa19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 ZC3H11AO75152 810 aaKnown RBP eCLIP19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 LGR5O75473 907 aa19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 ETS1P14921 441 aa19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 GPX6P59796 221 aa19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 CDK16Q00536 496 aa19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 PDCD2Q16342 344 aaPredicted RBP19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 GSTA3Q16772 222 aa19.95■□□□□ 0.78
SEMA3B-210ENST00000611067 ADGRD1Q6QNK2 874 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms