RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 ZCCHC9Q8N567 271 aaKnown RBP10.01□□□□□ -0.81
CTCFL-220ENST00000608858 CDC6Q99741 560 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 FAM124BQ9H5Z6 455 aaPredicted RBP10.01□□□□□ -0.81
CTCFL-220ENST00000608858 GMIPQ9P107 970 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 PTPRQQ9UMZ3 2332 aa10.01□□□□□ -0.81
CTCFL-220ENST00000608858 ANK1P16157 1881 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 KNL1Q8NG31 2342 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 TEX15Q9BXT5 2789 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 LEFTY2O00292 366 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 CYB561D2O14569 222 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 ABLIM1O14639 778 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 CPLX1O14810 134 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 TRIM24O15164 1050 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 TADA3O75528 432 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 HMGB1P09429 215 aaKnown RBP10□□□□□ -0.81
CTCFL-220ENST00000608858 ODC1P11926 461 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 TYMPP19971 482 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 CYP2F1P24903 491 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 LRPAP1P30533 357 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 MATKP42679 507 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 NPTX2P47972 431 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 EMP3P54852 163 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 NR5A1Q13285 461 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 KRT32Q14532 448 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 SMAD1Q15797 465 aaKnown RBP10□□□□□ -0.81
CTCFL-220ENST00000608858 ZBTB6Q15916 424 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 ARHGAP40Q5TG30 622 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 BLOC1S2Q6QNY1 142 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 PRICKLE2Q7Z3G6 844 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 MIB1Q86YT6 1006 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 THEM5Q8N1Q8 247 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 SPATA18Q8TC71 538 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 ACOX2Q99424 681 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 CPNE5Q9HCH3 593 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 SMPD4Q9NXE4 827 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 GCNT4Q9P109 453 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 HSFX1Q9UBD0 423 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 ZMYM5Q9UJ78 669 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 RAD54BQ9Y620 910 aa10□□□□□ -0.81
CTCFL-220ENST00000608858 MUC22E2RYF6 1773 aaPredicted RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 A0A1B0GTW7 788 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 A0A1B0GVT2 93 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 CAPN8A6NHC0 703 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 CBX4O00257 560 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 TRIM66O15016 1216 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 SLC16A4O15374 487 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 ZBTB24O43167 697 aaPredicted RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 DKK1O94907 266 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 ABL1P00519 1130 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 CSH1P0DML2 217 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 CSH2P0DML3 217 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 HOXB2P14652 356 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 NDUFV2P19404 249 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 PROZP22891 400 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 GRIA2P42262 883 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 TNFRSF4P43489 277 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 AARSP49588 968 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 CSNK1EP49674 416 aaKnown RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 IL9RQ01113 521 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 KCNH2Q12809 1159 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 USP4Q13107 963 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 RESTQ13127 1097 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 TARDBPQ13148 414 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 SAFBQ15424 915 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 ECM1Q16610 540 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 WDR45BQ5MNZ6 344 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 WSCD1Q658N2 575 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 USP49Q70CQ1 688 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 METTL23Q86XA0 190 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 ZNF513Q8N8E2 541 aaPredicted RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 BAHD1Q8TBE0 780 aaPredicted RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 DRC1Q96MC2 740 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 NAP1L4Q99733 375 aaKnown RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
CTCFL-220ENST00000608858 GPR174Q9BXC1 333 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 HAPLN2Q9GZV7 340 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 RNF38Q9H0F5 515 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 TMEM60Q9H2L4 133 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 BHMT2Q9H2M3 363 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 KMT5AQ9NQR1 393 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 HCN2Q9UL51 889 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 PCDHB5Q9Y5E4 795 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 STK36Q9NRP7 1315 aa9.99□□□□□ -0.81
CTCFL-220ENST00000608858 A0A1W2PQF6 199 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 MEI4A8MW99 385 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 WASH3PC4AMC7 463 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 TNFSF14O43557 240 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 RPS6KB1P23443 525 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 TLE3Q04726 772 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 KCNB1Q14721 858 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 PREPLQ4J6C6 727 aaPredicted RBP9.98□□□□□ -0.81
CTCFL-220ENST00000608858 PRAMEF14Q5SWL7 426 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 KIAA1324Q6UXG2 1013 aaKnown RBP9.98□□□□□ -0.81
CTCFL-220ENST00000608858 DBX2Q6ZNG2 339 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 SCN4BQ8IWT1 228 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 SPPL2BQ8TCT7 592 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 TOE1Q96GM8 510 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms