RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TXNDC5Q8NBS9 432 aaKnown RBP16.06■□□□□ 0.16
SSBP4-214ENST00000607020 CXorf38Q8TB03 319 aa16.06■□□□□ 0.16
SSBP4-214ENST00000607020 PNKPQ96T60 521 aa16.06■□□□□ 0.16
SSBP4-214ENST00000607020 BLOC1S4Q9NUP1 217 aa16.06■□□□□ 0.16
SSBP4-214ENST00000607020 EML5Q05BV3 1969 aa16.06■□□□□ 0.16
SSBP4-214ENST00000607020 PCNX2A6NKB5 2137 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 TISP43B9A030 160 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 SGK1O00141 431 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 LEFTY2O00292 366 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 SLC9A3R1O14745 358 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-214ENST00000607020 KLF8O95600 359 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-214ENST00000607020 CYP17A1P05093 508 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 SERPINF2P08697 491 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 PCSK1P29120 753 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 TNFRSF4P43489 277 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 PPP3CCP48454 512 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 RABEP1Q15276 862 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 DHCR24Q15392 516 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 VSTM1Q6UX27 236 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 RABEPKQ7Z6M1 372 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 SPATA2LQ8IUW3 424 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-214ENST00000607020 HDDC3Q8N4P3 179 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 TOP6BLQ8N6T0 577 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 C1orf127Q8N9H9 656 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 TTC16Q8NEE8 873 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 KCNV2Q8TDN2 545 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 CAPN10Q9HC96 672 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 AGAP1Q9UPQ3 857 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 GPSM3Q9Y4H4 160 aa16.05■□□□□ 0.16
SSBP4-214ENST00000607020 KAT7O95251 611 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 OLFM2O95897 454 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 ACAT1P24752 427 aaKnown RBP16.04■□□□□ 0.16
SSBP4-214ENST00000607020 POLR2BP30876 1174 aaKnown RBP16.04■□□□□ 0.16
SSBP4-214ENST00000607020 GRIA2P42262 883 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 SLC6A11P48066 632 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-214ENST00000607020 DPH6Q7L8W6 267 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 ZNF720Q7Z2F6 126 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 OSTM1Q86WC4 334 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 CHCHD4Q8N4Q1 142 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 FRMD1Q8N878 549 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 CACTINQ8WUQ7 758 aaKnown RBP16.04■□□□□ 0.16
SSBP4-214ENST00000607020 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 CALML4Q96GE6 196 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 STRA6Q9BX79 667 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 TRPM5Q9NZQ8 1165 aa16.04■□□□□ 0.16
SSBP4-214ENST00000607020 ASCC3Q8N3C0 2202 aaKnown RBP16.04■□□□□ 0.16
SSBP4-214ENST00000607020 ATG2BQ96BY7 2078 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 ZNF840PA6NDX5 716 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 AP5Z1O43299 807 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 OPHN1O60890 802 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 ADAM23O75077 832 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 TBCAO75347 108 aaKnown RBP16.03■□□□□ 0.16
SSBP4-214ENST00000607020 PPP1R37O75864 691 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 APODP05090 189 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 CD59P13987 128 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 ITPKAP23677 461 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
SSBP4-214ENST00000607020 FAM193AP78312 1265 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 MESP2Q0VG99 397 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 SLC14A1Q13336 389 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 EMC10Q5UCC4 262 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 RHBDF2Q6PJF5 856 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 SLC36A4Q6YBV0 504 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 C4orf50Q6ZRC1 276 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 TTC30AQ86WT1 665 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 SCN4BQ8IWT1 228 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 POMGNT1Q8WZA1 660 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 RAD54LQ92698 747 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 DNAAF2Q9NVR5 837 aaKnown RBP16.03■□□□□ 0.16
SSBP4-214ENST00000607020 EHD2Q9NZN4 543 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 ITGA11Q9UKX5 1188 aa16.03■□□□□ 0.16
SSBP4-214ENST00000607020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 ITGB3P05106 788 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 TIE1P35590 1138 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 UBA7P41226 1012 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 WNT7BP56706 349 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 RBP5P82980 135 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 TFAMQ00059 246 aaKnown RBP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 DHX8Q14562 1220 aaKnown RBP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 MCM6Q14566 821 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 MAPRE1Q15691 268 aaKnown RBP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 CCDC142Q17RM4 750 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 SOWAHAQ2M3V2 549 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 SOWAHCQ53LP3 525 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 BRSK2Q8IWQ3 736 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 PHTF2Q8N3S3 785 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 CSGALNACT2Q8N6G5 542 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 RNF38Q9H0F5 515 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 BCCIPQ9P287 314 aaKnown RBP eCLIP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 MAGEC2Q9UBF1 373 aaPredicted RBP16.02■□□□□ 0.16
SSBP4-214ENST00000607020 CDH9Q9ULB4 789 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 SNX9Q9Y5X1 595 aa16.02■□□□□ 0.16
SSBP4-214ENST00000607020 FREM2Q5SZK8 3169 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms