RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RFC1P35251 1148 aaPredicted RBP18.94■□□□□ 0.62
VRK3-225ENST00000601912 PAFAH1B1P43034 410 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 SLC6A3Q01959 620 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 MRPL58Q14197 206 aaKnown RBP18.94■□□□□ 0.62
VRK3-225ENST00000601912 KCNT2Q6UVM3 1135 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 LRRTM3Q86VH5 581 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 SPATA2LQ8IUW3 424 aaPredicted RBP18.94■□□□□ 0.62
VRK3-225ENST00000601912 SCUBE3Q8IX30 993 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 ZNF558Q96NG5 402 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 TMEM209Q96SK2 561 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 TTPALQ9BTX7 342 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 OXCT2Q9BYC2 517 aaPredicted RBP18.94■□□□□ 0.62
VRK3-225ENST00000601912 UBXN6Q9BZV1 441 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 ZCWPW1Q9H0M4 648 aa18.94■□□□□ 0.62
VRK3-225ENST00000601912 RC3H2Q9HBD1 1191 aaKnown RBP18.94■□□□□ 0.62
VRK3-225ENST00000601912 PAPSS1O43252 624 aaPredicted RBP18.93■□□□□ 0.62
VRK3-225ENST00000601912 LCP1P13796 627 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 LAG3P18627 525 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 CTNNA2P26232 953 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 SCNN1AP37088 669 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 NFE2Q16621 373 aaPredicted RBP18.93■□□□□ 0.62
VRK3-225ENST00000601912 CFAP221Q4G0U5 840 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 OLFML1Q6UWY5 402 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 ANKS3Q6ZW76 656 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 TMEM173Q86WV6 379 aaPredicted RBP18.93■□□□□ 0.62
VRK3-225ENST00000601912 CREG2Q8IUH2 290 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 CD101Q93033 1021 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 IGSF21Q96ID5 467 aa18.93■□□□□ 0.62
VRK3-225ENST00000601912 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.93■□□□□ 0.62
VRK3-225ENST00000601912 CTAGE15A4D2H0 777 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 DDX3YO15523 660 aaKnown RBP18.92■□□□□ 0.62
VRK3-225ENST00000601912 BEST1O76090 585 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CTAGE8P0CG41 777 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 BDNFP23560 247 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 PSMA2P25787 234 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CTNNA1P35221 906 aaKnown RBP18.92■□□□□ 0.62
VRK3-225ENST00000601912 RNASE9P60153 205 aaKnown RBP18.92■□□□□ 0.62
VRK3-225ENST00000601912 SLC39A12Q504Y0 691 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CTAGE6Q86UF2 777 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CTAGE4Q8IX94 777 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 SIX6OS1Q8N1H7 587 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 NIPA2Q8N8Q9 360 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 JOSD2Q8TAC2 188 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 SMOQ99835 787 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CSNK1G1Q9HCP0 422 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 TMLHEQ9NVH6 421 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 PCDHA3Q9Y5H8 950 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 ALPK3Q96L96 1907 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 GABBR2O75899 941 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 DESP17661 470 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CDR1P51861 262 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 ACAP1Q15027 740 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 USP41Q3LFD5 358 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 TMEM240Q5SV17 173 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
VRK3-225ENST00000601912 TMEM169Q96HH4 297 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 RPGRIP1Q96KN7 1286 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 ZBED2Q9BTP6 218 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CARD9Q9H257 536 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 DMAP1Q9NPF5 467 aaPredicted RBP18.92■□□□□ 0.62
VRK3-225ENST00000601912 PCDH10Q9P2E7 1040 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 USTQ9Y2C2 406 aa18.92■□□□□ 0.62
VRK3-225ENST00000601912 CEP104O60308 925 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 FBXO21O94952 628 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 GJB5O95377 273 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 OR4Q2P0C623 313 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 SSR1P43307 286 aaKnown RBP18.91■□□□□ 0.62
VRK3-225ENST00000601912 OGDHQ02218 1023 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 ADIGQ0VDE8 80 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 EFHC1Q5JVL4 640 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 RHOT1Q8IXI2 618 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 EMC1Q8N766 993 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 FUBP3Q96I24 572 aaKnown RBP eCLIP18.91■□□□□ 0.62
VRK3-225ENST00000601912 B3GALT6Q96L58 329 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 KCNK16Q96T55 309 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 LBHD1Q9BQE6 289 aaPredicted RBP18.91■□□□□ 0.62
VRK3-225ENST00000601912 PLVAPQ9BX97 442 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 AAASQ9NRG9 546 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 TMEM59LQ9UK28 342 aa18.91■□□□□ 0.62
VRK3-225ENST00000601912 MRPL42Q9Y6G3 142 aaKnown RBP18.91■□□□□ 0.62
VRK3-225ENST00000601912 COL4A6Q14031 1691 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 PSTPIP1O43586 416 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 SYN1P17600 705 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 GPD1P21695 349 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 PEX5P50542 639 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 TKTL1P51854 596 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 RWDD2BP57060 319 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 ZNF252P-AS1Q0IIN9 211 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 SMARCB1Q12824 385 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 RTP2Q5QGT7 225 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 KIAA1841Q6NSI8 718 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 CC2D1AQ6P1N0 951 aaPredicted RBP18.9■□□□□ 0.62
VRK3-225ENST00000601912 SLC26A9Q7LBE3 791 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 ARCQ7LC44 396 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 CPNE8Q86YQ8 564 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 COLGALT1Q8NBJ5 622 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 ZMIZ2Q8NF64 920 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 KRT35Q92764 455 aa18.9■□□□□ 0.62
VRK3-225ENST00000601912 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.9■□□□□ 0.621e-6■■■□□ 15.1
Retrieved 100 of 20,778 RNA–protein pairs in 371 ms