RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 LPAL2Q16609 132 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 TMEM196Q5HYL7 178 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 B3GNT5Q9BYG0 378 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 ZNF518BQ9C0D4 1074 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 SDCBP2Q9H190 292 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 SMYD3Q9H7B4 428 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 NCDNQ9UBB6 729 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 WNT6Q9Y6F9 365 aa24.42■■□□□ 1.5
CCDC61-207ENST00000599044 A8MXQ7 604 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 HRO43593 1189 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 FAM163BP0C2L3 166 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 ATICP31939 592 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 PPP2R5DQ14738 602 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 CC2D1AQ6P1N0 951 aaPredicted RBP24.41■■□□□ 1.5
CCDC61-207ENST00000599044 DENND5BQ6ZUT9 1274 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 GOLGA5Q8TBA6 731 aa24.41■■□□□ 1.5
CCDC61-207ENST00000599044 POLR3BQ9NW08 1133 aaPredicted RBP24.41■■□□□ 1.5
CCDC61-207ENST00000599044 RALGAPA1Q6GYQ0 2036 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 PAPSS2O95340 614 aaPredicted RBP24.4■■□□□ 1.5
CCDC61-207ENST00000599044 RPN1P04843 607 aaKnown RBP24.4■■□□□ 1.5
CCDC61-207ENST00000599044 HDCP19113 662 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 GALK1P51570 392 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 USP4Q13107 963 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 BIRC3Q13489 604 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 HEATR6Q6AI08 1181 aaKnown RBP24.4■■□□□ 1.5
CCDC61-207ENST00000599044 SLC9A9Q8IVB4 645 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 FSIP1Q8NA03 581 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 B3GALNT2Q8NCR0 500 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 SH3RF2Q8TEC5 729 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 TMEM174Q8WUU8 243 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
CCDC61-207ENST00000599044 C8orf48Q96LL4 319 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 TTLL2Q9BWV7 592 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 LINC00597Q9H2U6 94 aa24.4■■□□□ 1.5
CCDC61-207ENST00000599044 DUS2Q9NX74 493 aaKnown RBP24.4■■□□□ 1.5
CCDC61-207ENST00000599044 GREB1Q4ZG55 1949 aa24.39■■□□□ 1.5
CCDC61-207ENST00000599044 FAM237AA0A1B0GTK4 181 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 TRDMT1O14717 391 aaKnown RBP24.39■■□□□ 1.49
CCDC61-207ENST00000599044 EGFP01133 1207 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 NR3C1P04150 777 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 TGM1P22735 817 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 ANXA13P27216 316 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 GJA4P35212 333 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 SYKP43405 635 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 KRT85P78386 507 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 NCOA4Q13772 614 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 PDGFRLQ15198 375 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 C1orf220Q5T0J3 134 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 SYNPOQ8N3V7 929 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 OSCP1Q8WVF1 389 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 RNF38Q9H0F5 515 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 GOLPH3LQ9H4A5 285 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 ECT2Q9H8V3 914 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 VRTNQ9H8Y1 702 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 USP25Q9UHP3 1055 aa24.39■■□□□ 1.49
CCDC61-207ENST00000599044 PTPRDP23468 1912 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 ZNF840PA6NDX5 716 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 PDXKO00764 312 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 TRIM66O15016 1216 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 NOP14P78316 857 aaKnown RBP24.38■■□□□ 1.49
CCDC61-207ENST00000599044 KCNB1Q14721 858 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 ZNF699Q32M78 642 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 EML3Q32P44 896 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 SCARA5Q6ZMJ2 495 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 PAQR9Q6ZVX9 377 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 EZH1Q92800 747 aaPredicted RBP24.38■■□□□ 1.49
CCDC61-207ENST00000599044 CEP295NLQ96MC4 621 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 IPO9Q96P70 1041 aaKnown RBP24.38■■□□□ 1.49
CCDC61-207ENST00000599044 TRPM5Q9NZQ8 1165 aa24.38■■□□□ 1.49
CCDC61-207ENST00000599044 ANAPC1Q9H1A4 1944 aa24.37■■□□□ 1.49
CCDC61-207ENST00000599044 GRSF1Q12849 480 aaKnown RBP eCLIP24.37■■□□□ 1.49
CCDC61-207ENST00000599044 KCNK16Q96T55 309 aa24.37■■□□□ 1.49
CCDC61-207ENST00000599044 PARD6AQ9NPB6 346 aa24.37■■□□□ 1.49
CCDC61-207ENST00000599044 ARHGAP26Q9UNA1 814 aa24.37■■□□□ 1.49
CCDC61-207ENST00000599044 MAPK8IP1Q9UQF2 711 aa24.37■■□□□ 1.49
CCDC61-207ENST00000599044 SPAG17Q6Q759 2223 aa24.37■■□□□ 1.49
CCDC61-207ENST00000599044 PXNP49023 591 aaPredicted RBP24.36■■□□□ 1.49
CCDC61-207ENST00000599044 AP3M2P53677 418 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 DPYDQ12882 1025 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 TAF10Q12962 218 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 ORC1Q13415 861 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 ZNF667Q5HYK9 610 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 CEP135Q66GS9 1140 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 PRR23BQ6ZRT6 265 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 LONP2Q86WA8 852 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 ELOVL4Q9GZR5 314 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 GDPD2Q9HCC8 539 aa24.36■■□□□ 1.49
CCDC61-207ENST00000599044 LEFTY2O00292 366 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 ABL1P00519 1130 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 MYL1P05976 194 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 TCF3P15923 654 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 IFNAR2P48551 515 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 IFRD2Q12894 506 aaPredicted RBP24.35■■□□□ 1.49
CCDC61-207ENST00000599044 ZACNQ401N2 412 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 SPOPLQ6IQ16 392 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 SV2AQ7L0J3 742 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 CPA6Q8N4T0 437 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 P2RY13Q9BPV8 354 aa24.35■■□□□ 1.49
CCDC61-207ENST00000599044 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.35■■□□□ 1.497e-8■■■■■ 139.2
CCDC61-207ENST00000599044 HMGXB4Q9UGU5 601 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms