RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 PTPRDP23468 1912 aa20.17■□□□□ 0.82
SNRPA-204ENST00000598452 NCOR2Q9Y618 2525 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 MYH10P35580 1976 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 LRP3O75074 770 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 ATG13O75143 517 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 DRD1P21728 446 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 ANXA13P27216 316 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 AFMP43652 599 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 CACNA2D1P54289 1103 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 CUL4BQ13620 913 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 MAPRE1Q15691 268 aaKnown RBP20.16■□□□□ 0.82
SNRPA-204ENST00000598452 CSRP2Q16527 193 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 WDR72Q3MJ13 1102 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 PRR23CQ6ZRP0 262 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 HS2ST1Q7LGA3 356 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 GRAMD1CQ8IYS0 662 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 HHIPQ96QV1 700 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 CGNQ9P2M7 1197 aaKnown RBP20.16■□□□□ 0.82
SNRPA-204ENST00000598452 PCDHA7Q9UN72 937 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 UBE4BO95155 1302 aa20.16■□□□□ 0.82
SNRPA-204ENST00000598452 F8VP50 259 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 AXIN1O15169 862 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 GDF9O60383 454 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 TACC1O75410 805 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 RPP40O75818 363 aaKnown RBP20.15■□□□□ 0.82
SNRPA-204ENST00000598452 ZSCAN22P10073 491 aaPredicted RBP20.15■□□□□ 0.82
SNRPA-204ENST00000598452 ME1P48163 572 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 CASP4P49662 377 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 MYL6P60660 151 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 CCDC6Q16204 474 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 KBTBD6Q86V97 674 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 HSCBQ8IWL3 235 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 RPLP0P6Q8NHW5 317 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 GAB3Q8WWW8 586 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 CD101Q93033 1021 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 ATP2A3Q93084 1043 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 CEP295NLQ96MC4 621 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 TMEM30AQ9NV96 361 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 FAM13BQ9NYF5 915 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 TRPM5Q9NZQ8 1165 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 NXF1Q9UBU9 619 aaKnown RBP20.15■□□□□ 0.82
SNRPA-204ENST00000598452 ARHGAP26Q9UNA1 814 aa20.15■□□□□ 0.82
SNRPA-204ENST00000598452 F13A1P00488 732 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 PTPN1P18031 435 aaKnown RBP20.14■□□□□ 0.81
SNRPA-204ENST00000598452 TNNC1P63316 161 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 PSMD2Q13200 908 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 TRPC3Q13507 836 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 PLEKHO2Q8TD55 490 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 NETO1Q8TDF5 533 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 ELMO3Q96BJ8 720 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 TTLL2Q9BWV7 592 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 ZNF518BQ9C0D4 1074 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 ARRDC1-AS1Q9H2J1 176 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 CFAP45Q9UL16 551 aa20.14■□□□□ 0.81
SNRPA-204ENST00000598452 HELZP42694 1942 aaKnown RBP20.14■□□□□ 0.81
SNRPA-204ENST00000598452 ZNF840PA6NDX5 716 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 ANTXRLA6NF34 631 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 LEFTY2O00292 366 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 CLDN5O00501 218 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 SCAMP3O14828 347 aaKnown RBP20.13■□□□□ 0.81
SNRPA-204ENST00000598452 SLC30A4O14863 429 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 TRIM66O15016 1216 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 ABL1P00519 1130 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 CCDC192P0DO97 292 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 IFRD2Q12894 506 aaPredicted RBP20.13■□□□□ 0.81
SNRPA-204ENST00000598452 PKP1Q13835 747 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 KNOP1Q1ED39 458 aaKnown RBP20.13■□□□□ 0.81
SNRPA-204ENST00000598452 BMT2Q1RMZ1 405 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 FBXO43Q4G163 708 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 RESP18Q5W5W9 173 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 C8orf48Q96LL4 319 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 B3GNT5Q9BYG0 378 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 RNF38Q9H0F5 515 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 XYLT2Q9H1B5 865 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 SMPD4Q9NXE4 827 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 EHD2Q9NZN4 543 aa20.13■□□□□ 0.81
SNRPA-204ENST00000598452 CCDC163A0A0D9SF12 145 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 PVALEFA0A1B0GWK0 134 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 A8MXQ7 604 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 EXOC3O60645 756 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 TCF3P15923 654 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 PDE6CP51160 858 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 CDH8P55286 799 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 NOP14P78316 857 aaKnown RBP20.12■□□□□ 0.81
SNRPA-204ENST00000598452 TAF10Q12962 218 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 NR1H3Q13133 447 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 SF3A2Q15428 464 aaKnown RBP20.12■□□□□ 0.81
SNRPA-204ENST00000598452 CACNA2D4Q7Z3S7 1137 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 CAMKK1Q8N5S9 505 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 SPRYD3Q8NCJ5 442 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 SMYD3Q9H7B4 428 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 SERTAD1Q9UHV2 236 aa20.12■□□□□ 0.81
SNRPA-204ENST00000598452 SDK1Q7Z5N4 2213 aa20.11■□□□□ 0.81
SNRPA-204ENST00000598452 PHACTR2O75167 634 aa20.11■□□□□ 0.81
SNRPA-204ENST00000598452 PFKLP17858 780 aa20.11■□□□□ 0.81
SNRPA-204ENST00000598452 OPRD1P41143 372 aa20.11■□□□□ 0.81
SNRPA-204ENST00000598452 RAP1GAPP47736 663 aa20.11■□□□□ 0.81
SNRPA-204ENST00000598452 DMC1Q14565 340 aa20.11■□□□□ 0.81
SNRPA-204ENST00000598452 GAB4Q2WGN9 574 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms