RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 TSTD1Q8NFU3 115 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 CCDC26Q8TAB7 109 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 USP28Q96RU2 1077 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 DUSP15Q9H1R2 295 aaPredicted RBP11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 CRTAC1Q9NQ79 661 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 ANGPTL2Q9UKU9 493 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 INVSQ9Y283 1065 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 A0A087X0B3 334 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 LEFTY2O00292 366 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TM4SF5O14894 197 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TRIM66O15016 1216 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 CAVIN2O95810 425 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TCF3P15923 654 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TNNI1P19237 187 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 WARSP23381 471 aaKnown RBP11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 GNL1P36915 607 aaPredicted RBP11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 STK38Q15208 465 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 USP39Q53GS9 565 aaKnown RBP11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 C2orf27AQ580R0 203 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TCEAL6Q6IPX3 200 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TTC30AQ86WT1 665 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 CBWD2Q8IUF1 395 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 OR6B3Q8NGW1 331 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 EZH1Q92800 747 aaPredicted RBP11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TCEAL3Q969E4 200 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 PCED1BQ96HM7 432 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 SPATA17Q96L03 361 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 SNX25Q9H3E2 840 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 HSPBP1Q9NZL4 362 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 EHD2Q9NZN4 543 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 EBF1Q9UH73 591 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 PLXND1Q9Y4D7 1925 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 PTPRJQ12913 1337 aa11.28□□□□□ -0.6
CHMP2A-202ENST00000596708 CLIC2O15247 247 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 KCNK5O95279 499 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 CST3P01034 146 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 DLATP10515 647 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 PFKLP17858 780 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 OPRD1P41143 372 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 USP46P62068 366 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 AMPD3Q01432 767 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 IFRD2Q12894 506 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 MDH1BQ5I0G3 518 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 TDRD10Q5VZ19 366 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 LIMS2Q7Z4I7 341 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 WDR49Q8IV35 697 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 CCDC33Q8N5R6 958 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 GLIS3Q8NEA6 775 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 MYCBPAPQ8TBZ2 947 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 USP33Q8TEY7 942 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 HPS3Q969F9 1004 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 CEP295NLQ96MC4 621 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 FNBP1Q96RU3 617 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 MRPL45Q9BRJ2 306 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 LSM14BQ9BX40 385 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 KIAA1586Q9HCI6 787 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 FOXD4L1Q9NU39 408 aa11.27□□□□□ -0.61
CHMP2A-202ENST00000596708 BCLAF3A2AJT9 711 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 C4orf47A7E2U8 309 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 F8VP50 259 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 K7EQS6 105 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 SLC9A3R1O14745 358 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 CLSTN1O94985 981 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 MBL2P11226 248 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 PMLP29590 882 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 PPP3CCP48454 512 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 TNNC1P63316 161 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 ASIC1P78348 528 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 ZXDBP98169 803 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 TRPC3Q13507 836 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 WDR72Q3MJ13 1102 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 ANO7Q6IWH7 933 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 C11orf74Q86VG3 221 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 ADGRG2Q8IZP9 1017 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 CCDC127Q96BQ5 260 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 C8orf48Q96LL4 319 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 RNF38Q9H0F5 515 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 SMPD4Q9NXE4 827 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 CPQQ9Y646 472 aa11.26□□□□□ -0.61
CHMP2A-202ENST00000596708 ZNF840PA6NDX5 716 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 A8MXQ7 604 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 SCAMP3O14828 347 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 EIF3DO15371 548 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 TACC1O75410 805 aa11.25□□□□□ -0.61
CHMP2A-202ENST00000596708 ALDH1A2O94788 518 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms