RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 KCNK5O95279 499 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 OPRD1P41143 372 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 CUL4AQ13619 759 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 DPH6Q7L8W6 267 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 LIMS2Q7Z4I7 341 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 TSTD1Q8NFU3 115 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 USP28Q96RU2 1077 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 MMS19Q96T76 1030 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 EDEM2Q9BV94 578 aa18.68■□□□□ 0.58
RETREG3-212ENST00000593251 LSM14BQ9BX40 385 aaKnown RBP18.68■□□□□ 0.58
RETREG3-212ENST00000593251 CFAP47Q6ZTR5 3102 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 ZFHX4Q86UP3 3567 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 BCLAF3A2AJT9 711 aaKnown RBP18.67■□□□□ 0.58
RETREG3-212ENST00000593251 ZNF233A6NK53 670 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 K7EQS6 105 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 LEFTY2O00292 366 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 NFATC1O95644 943 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 CAVIN2O95810 425 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 TCF3P15923 654 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 PDCP20941 246 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 SYT1P21579 422 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 GAB4Q2WGN9 574 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 VSTM1Q6UX27 236 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 DENND5BQ6ZUT9 1274 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 CCDC65Q8IXS2 484 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 USP33Q8TEY7 942 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 PCED1BQ96HM7 432 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 SPATA17Q96L03 361 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 TRPM5Q9NZQ8 1165 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 NME7Q9Y5B8 376 aa18.67■□□□□ 0.58
RETREG3-212ENST00000593251 TNRC6BQ9UPQ9 1833 aaKnown RBP18.67■□□□□ 0.58
RETREG3-212ENST00000593251 CEP192Q8TEP8 1941 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 ABL1P00519 1130 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 BCKDHBP21953 392 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 WARSP23381 471 aaKnown RBP18.66■□□□□ 0.58
RETREG3-212ENST00000593251 ANXA13P27216 316 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 DUOXA2Q1HG44 320 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 MDH1BQ5I0G3 518 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 ANO7Q6IWH7 933 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 PSAPL1Q6NUJ1 521 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 FILIP1Q7Z7B0 1213 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 SFTPA1Q8IWL2 248 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 RDH13Q8NBN7 331 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 MRPL45Q9BRJ2 306 aaKnown RBP18.66■□□□□ 0.58
RETREG3-212ENST00000593251 RNF38Q9H0F5 515 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 SMPD4Q9NXE4 827 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 HSPBP1Q9NZL4 362 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 MYH10P35580 1976 aa18.66■□□□□ 0.58
RETREG3-212ENST00000593251 C4orf47A7E2U8 309 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 F8VP50 259 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 GIPC1O14908 333 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 CYP17A1P05093 508 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 HOXD13P35453 343 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 CACNA2D1P54289 1103 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 IFRD2Q12894 506 aaPredicted RBP18.65■□□□□ 0.58
RETREG3-212ENST00000593251 SLC39A14Q15043 492 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 SURF1Q15526 300 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 MAPRE1Q15691 268 aaKnown RBP18.65■□□□□ 0.58
RETREG3-212ENST00000593251 PMS2CLQ68D20 193 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 HS2ST1Q7LGA3 356 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 MYCBPAPQ8TBZ2 947 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 CPQQ9Y646 472 aa18.65■□□□□ 0.58
RETREG3-212ENST00000593251 MYO18AQ92614 2054 aaKnown RBP18.65■□□□□ 0.58
RETREG3-212ENST00000593251 LNP1A1A4G5 178 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 ZNF840PA6NDX5 716 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 PATE3B3GLJ2 98 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 TRIM66O15016 1216 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 KIAA0391O15091 583 aaKnown RBP18.64■□□□□ 0.57
RETREG3-212ENST00000593251 CST3P01034 146 aaPredicted RBP18.64■□□□□ 0.57
RETREG3-212ENST00000593251 DLATP10515 647 aaKnown RBP18.64■□□□□ 0.57
RETREG3-212ENST00000593251 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.57
RETREG3-212ENST00000593251 SLC6A11P48066 632 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 PDE6CP51160 858 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 MESP2Q0VG99 397 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 USP39Q53GS9 565 aaKnown RBP18.64■□□□□ 0.57
RETREG3-212ENST00000593251 TRAPPC11Q7Z392 1133 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 WDR49Q8IV35 697 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 MDGA1Q8NFP4 955 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 OR6B3Q8NGW1 331 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 TTLL2Q9BWV7 592 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 SNX25Q9H3E2 840 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 DPEP3Q9H4B8 488 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 TMEM30AQ9NV96 361 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 MMP17Q9ULZ9 603 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 ADAMTS9Q9P2N4 1935 aa18.64■□□□□ 0.57
RETREG3-212ENST00000593251 PLXND1Q9Y4D7 1925 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 GNL1P36915 607 aaPredicted RBP18.63■□□□□ 0.57
RETREG3-212ENST00000593251 NOVA1P51513 510 aaKnown RBP18.63■□□□□ 0.57
RETREG3-212ENST00000593251 SLC7A9P82251 487 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 SHC2P98077 582 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 TAF10Q12962 218 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 DHCR24Q15392 516 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 TMEM92Q6UXU6 159 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 STXBP4Q6ZWJ1 553 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 RASSF3Q86WH2 238 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 ADGRG2Q8IZP9 1017 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 CCDC26Q8TAB7 109 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms