RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TRIM66O15016 1216 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 ATG13O75143 517 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 PAPSS2O95340 614 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-243ENST00000593128 GJA4P35212 333 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 KNOP1Q1ED39 458 aaKnown RBP19.13■□□□□ 0.65
CIRBP-243ENST00000593128 SCARA5Q6ZMJ2 495 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 LIMS2Q7Z4I7 341 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 ZNF516Q92618 1163 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 EXOC4Q96A65 974 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 ELMO3Q96BJ8 720 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 SPATA17Q96L03 361 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 EXOC1Q9NV70 894 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 DLL3Q9NYJ7 618 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 RALGAPA1Q6GYQ0 2036 aa19.13■□□□□ 0.65
CIRBP-243ENST00000593128 PVALEFA0A1B0GWK0 134 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 PRR5-ARHGAP8B1AHC4 643 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 CLDN5O00501 218 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 TRDMT1O14717 391 aaKnown RBP19.12■□□□□ 0.65
CIRBP-243ENST00000593128 SCAMP3O14828 347 aaKnown RBP19.12■□□□□ 0.65
CIRBP-243ENST00000593128 RETP07949 1114 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 CCDC192P0DO97 292 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 PTPN1P18031 435 aaKnown RBP19.12■□□□□ 0.65
CIRBP-243ENST00000593128 CNR2P34972 360 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 RAP1GAPP47736 663 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
CIRBP-243ENST00000593128 ARHGAP8P85298 464 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 EHHADHQ08426 723 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 USP4Q13107 963 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 WDR5BQ86VZ2 330 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 FAM160A2Q8N612 972 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-243ENST00000593128 MED10Q9BTT4 135 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 SMPD4Q9NXE4 827 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 GCNT4Q9P109 453 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 NME7Q9Y5B8 376 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 DNAH14Q0VDD8 3507 aa19.12■□□□□ 0.65
CIRBP-243ENST00000593128 AXIN1O15169 862 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 PDIA4P13667 645 aaKnown RBP19.11■□□□□ 0.65
CIRBP-243ENST00000593128 DRD1P21728 446 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 SDHBP21912 280 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 PDE6CP51160 858 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 ATXN1P54253 815 aaKnown RBP19.11■□□□□ 0.65
CIRBP-243ENST00000593128 CACNA2D1P54289 1103 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 CDH8P55286 799 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 NR1H3Q13133 447 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 BMT2Q1RMZ1 405 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 ZNF699Q32M78 642 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 TDRD10Q5VZ19 366 aaKnown RBP19.11■□□□□ 0.65
CIRBP-243ENST00000593128 RPLP0P6Q8NHW5 317 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 CD101Q93033 1021 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 SYAP1Q96A49 352 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-243ENST00000593128 HHIPQ96QV1 700 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 ZNF518BQ9C0D4 1074 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 LINC00597Q9H2U6 94 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 SMYD3Q9H7B4 428 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 EHD2Q9NZN4 543 aa19.11■□□□□ 0.65
CIRBP-243ENST00000593128 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-243ENST00000593128 A0A1B0GVL5 298 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 DCDC2BA2VCK2 349 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 LEFTY2O00292 366 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 TACC1O75410 805 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 RPP40O75818 363 aaKnown RBP19.1■□□□□ 0.65
CIRBP-243ENST00000593128 KCNA4P22459 653 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 TGM1P22735 817 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 SEC13P55735 322 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 CCDC6Q16204 474 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 EML3Q32P44 896 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 KMT5BQ4FZB7 885 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 ATL3Q6DD88 541 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 B3GALNT2Q8NCR0 500 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 GOLGA5Q8TBA6 731 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 PLEKHO2Q8TD55 490 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 PAGE5Q96GU1 130 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 B3GNT5Q9BYG0 378 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 ELOVL4Q9GZR5 314 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 SEMA4GQ9NTN9 838 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 CGNQ9P2M7 1197 aaKnown RBP19.1■□□□□ 0.65
CIRBP-243ENST00000593128 ARHGAP26Q9UNA1 814 aa19.1■□□□□ 0.65
CIRBP-243ENST00000593128 LRRIQ3A6PVS8 624 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-243ENST00000593128 NFATC1O95644 943 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 SLFN14P0C7P3 912 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 ATICP31939 592 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 TAF10Q12962 218 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 STK4Q13043 487 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 ZNF667Q5HYK9 610 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 C12orf56Q8IXR9 622 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 CHAMP1Q96JM3 812 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 C8orf48Q96LL4 319 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 SLITRK1Q96PX8 696 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-243ENST00000593128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.09■□□□□ 0.654e-7■■■■■ 57
CIRBP-243ENST00000593128 CPQQ9Y646 472 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 MYO16Q9Y6X6 1858 aa19.09■□□□□ 0.65
CIRBP-243ENST00000593128 ATP8B3O60423 1300 aa19.08■□□□□ 0.65
CIRBP-243ENST00000593128 ZNF840PA6NDX5 716 aa19.08■□□□□ 0.64
CIRBP-243ENST00000593128 ACTN4O43707 911 aaKnown RBP19.08■□□□□ 0.64
CIRBP-243ENST00000593128 KLRC4O43908 158 aa19.08■□□□□ 0.64
CIRBP-243ENST00000593128 PFKFB1P16118 471 aa19.08■□□□□ 0.64
CIRBP-243ENST00000593128 ORC1Q13415 861 aa19.08■□□□□ 0.64
CIRBP-243ENST00000593128 NCOA4Q13772 614 aa19.08■□□□□ 0.64
CIRBP-243ENST00000593128 FBXO43Q4G163 708 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms