RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ARSAP15289 507 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 ME1P48163 572 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 PSMC1P62191 440 aaKnown RBP20.12■□□□□ 0.81
CCDC43-205ENST00000592333 CLDN10P78369 228 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 CYP27A1Q02318 531 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 SPEM2Q0P670 501 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 TRPC3Q13507 836 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 EML3Q32P44 896 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 CEP68Q76N32 757 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 STKLD1Q8NE28 680 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 RIN3Q8TB24 985 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 GAB3Q8WWW8 586 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 CCDC127Q96BQ5 260 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 SLC22A12Q96S37 553 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 SEMA4GQ9NTN9 838 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 RCOR1Q9UKL0 485 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 GREB1Q4ZG55 1949 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 CLIC2O15247 247 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 EXOC3O60645 756 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 NFATC1O95644 943 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 OLFM2O95897 454 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 SLFN14P0C7P3 912 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 PTPN1P18031 435 aaKnown RBP20.11■□□□□ 0.81
CCDC43-205ENST00000592333 CYP2J2P51589 502 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 SLC7A9P82251 487 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 CCDC142Q17RM4 750 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 SYT13Q7L8C5 426 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 CACNA2D4Q7Z3S7 1137 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 SLC9A9Q8IVB4 645 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 NELFCDQ8IXH7 590 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 CEP57L1Q8IYX8 460 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 ARL14EPQ8N8R7 260 aaPredicted RBP20.11■□□□□ 0.81
CCDC43-205ENST00000592333 OR6B3Q8NGW1 331 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 SH3RF2Q8TEC5 729 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 OVCA2Q8WZ82 227 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 CD101Q93033 1021 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 ACDQ96AP0 544 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 XYLT2Q9H1B5 865 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 C2orf42Q9NWW7 574 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 USP25Q9UHP3 1055 aa20.11■□□□□ 0.81
CCDC43-205ENST00000592333 PTPRDP23468 1912 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 ANAPC1Q9H1A4 1944 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 MED19A0JLT2 244 aaPredicted RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 C2orf78A6NCI8 922 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 ZNF840PA6NDX5 716 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 SLC9A3R1O14745 358 aaPredicted RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 EGFP01133 1207 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 LPAL2Q16609 132 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 TDRD10Q5VZ19 366 aaKnown RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 HEATR6Q6AI08 1181 aaKnown RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 FAM160A2Q8N612 972 aaPredicted RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 ZC3H10Q96K80 434 aaKnown RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 SLITRK1Q96PX8 696 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 MRPL45Q9BRJ2 306 aaKnown RBP20.1■□□□□ 0.81
CCDC43-205ENST00000592333 SLC39A2Q9NP94 309 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 EBF1Q9UH73 591 aa20.1■□□□□ 0.81
CCDC43-205ENST00000592333 A8MXQ7 604 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 SLC30A4O14863 429 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 RNF40O75150 1001 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 RPP40O75818 363 aaKnown RBP20.09■□□□□ 0.81
CCDC43-205ENST00000592333 RAP1GAPP47736 663 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 PRR23CQ6ZRP0 262 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 DDX42Q86XP3 938 aaKnown RBP eCLIP20.09■□□□□ 0.81
CCDC43-205ENST00000592333 B3GALNT2Q8NCR0 500 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 PDZD8Q8NEN9 1154 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 PARD3BQ8TEW8 1205 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 ZNF516Q92618 1163 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 TNIP3Q96KP6 325 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 GZF1Q9H116 711 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-205ENST00000592333 BLZF1Q9H2G9 400 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 FBRSL1Q9HCM7 1045 aaKnown RBP20.09■□□□□ 0.81
CCDC43-205ENST00000592333 DMAC2Q9NW81 257 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 COMMD8Q9NX08 183 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 PCDHGA5Q9Y5G8 931 aa20.09■□□□□ 0.81
CCDC43-205ENST00000592333 ATP8B3O60423 1300 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 F8VP50 259 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 PHACTR2O75167 634 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 RTN3O95197 1032 aaPredicted RBP20.08■□□□□ 0.81
CCDC43-205ENST00000592333 MYL6P60660 151 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 CUL4BQ13620 913 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 PKN3Q6P5Z2 889 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 DDX1Q92499 740 aaKnown RBP20.08■□□□□ 0.81
CCDC43-205ENST00000592333 DUSP9Q99956 384 aaKnown RBP20.08■□□□□ 0.81
CCDC43-205ENST00000592333 WNT6Q9Y6F9 365 aa20.08■□□□□ 0.81
CCDC43-205ENST00000592333 LEFTY2O00292 366 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 PDXKO00764 312 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 OAS1P00973 400 aaKnown RBP20.07■□□□□ 0.8
CCDC43-205ENST00000592333 RPN1P04843 607 aaKnown RBP20.07■□□□□ 0.8
CCDC43-205ENST00000592333 EIF2DP41214 584 aaKnown RBP20.07■□□□□ 0.8
CCDC43-205ENST00000592333 AFMP43652 599 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 LIMK1P53667 647 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 USP46P62068 366 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 SRSF5Q13243 272 aaKnown RBP20.07■□□□□ 0.8
CCDC43-205ENST00000592333 SNX30Q5VWJ9 437 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 NUP93Q8N1F7 819 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 TAF4BQ92750 862 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 NME7Q9Y5B8 376 aa20.07■□□□□ 0.8
CCDC43-205ENST00000592333 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.07■□□□□ 0.8
CCDC43-205ENST00000592333 HELZP42694 1942 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 348 ms