RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 MAGEA4P43358 317 aa20.68■□□□□ 0.9
MBD3-209ENST00000592012 CORO7P57737 925 aa20.68■□□□□ 0.9
MBD3-209ENST00000592012 TTC30AQ86WT1 665 aa20.68■□□□□ 0.9
MBD3-209ENST00000592012 RXFP2Q8WXD0 754 aa20.68■□□□□ 0.9
MBD3-209ENST00000592012 PEBP4Q96S96 227 aa20.68■□□□□ 0.9
MBD3-209ENST00000592012 TRIM6Q9C030 488 aaPredicted RBP20.68■□□□□ 0.9
MBD3-209ENST00000592012 HAS3O00219 553 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 IGF2BP3O00425 579 aaKnown RBP eCLIP20.67■□□□□ 0.9
MBD3-209ENST00000592012 IFNB1P01574 187 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 PDGFRAP16234 1089 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 AKAP5P24588 427 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 MORF4L2Q15014 288 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 CCDC38Q502W7 563 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 C9orf57Q5W0N0 161 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 CEP128Q6ZU80 1094 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 TAOK1Q7L7X3 1001 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 ATXN2LQ8WWM7 1075 aaKnown RBP20.67■□□□□ 0.9
MBD3-209ENST00000592012 HSPH1Q92598 858 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 DNAH12Q6ZR08 3092 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 TREHO43280 583 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 PECAM1P16284 738 aaPredicted RBP20.67■□□□□ 0.9
MBD3-209ENST00000592012 RGS7P49802 495 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 CCL14Q16627 93 aa20.67■□□□□ 0.9
MBD3-209ENST00000592012 RNASEH2BQ5TBB1 312 aaKnown RBP20.67■□□□□ 0.9
MBD3-209ENST00000592012 CYP4V2Q6ZWL3 525 aaPredicted RBP20.67■□□□□ 0.9
MBD3-209ENST00000592012 ENDOD1O94919 500 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 AXLP30530 894 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 PSEN2P49810 448 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 ZNF200P98182 395 aaPredicted RBP20.66■□□□□ 0.9
MBD3-209ENST00000592012 SNX17Q15036 470 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 CCDC142Q17RM4 750 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 SOWAHAQ2M3V2 549 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 C15orf59Q2T9L4 293 aaPredicted RBP20.66■□□□□ 0.9
MBD3-209ENST00000592012 RAB6CQ53S08 254 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 TMEM110Q86TL2 294 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 SLC35F5Q8WV83 523 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 SLC4A5Q9BY07 1137 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 RAB6CQ9H0N0 254 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 C10orf88Q9H8K7 445 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 CTNNAL1Q9UBT7 734 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 TRIM66O15016 1216 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 GRAP2O75791 330 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 GDF10P55107 478 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 SPATS2Q86XZ4 545 aaKnown RBP20.66■□□□□ 0.9
MBD3-209ENST00000592012 USP6NLQ92738 828 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 ARHGEF2Q92974 986 aaKnown RBP20.66■□□□□ 0.9
MBD3-209ENST00000592012 APOL6Q9BWW8 343 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 FAM49BQ9NUQ9 324 aa20.66■□□□□ 0.9
MBD3-209ENST00000592012 HUNKP57058 714 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 QPCTQ16769 361 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 CHADLQ6NUI6 762 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 OLFML1Q6UWY5 402 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 UNC93AQ86WB7 457 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 RFX6Q8HWS3 928 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 KHSRPQ92945 711 aaKnown RBP eCLIP20.65■□□□□ 0.9
MBD3-209ENST00000592012 CALN1Q9BXU9 219 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 RSAD1Q9HA92 442 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 SAYSD1Q9NPB0 183 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 UBQLN1Q9UMX0 589 aaKnown RBP20.65■□□□□ 0.9
MBD3-209ENST00000592012 PIN4Q9Y237 131 aaKnown RBP20.65■□□□□ 0.9
MBD3-209ENST00000592012 SMIM28A0A1B0GU29 152 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 APOC4-APOC2K7ER74 178 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 PIRO00625 290 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 APOC2P02655 101 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 ABHD2P08910 425 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 CPT1AP50416 773 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 CCDC14Q49A88 953 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 OR6B3Q8NGW1 331 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 INTS9Q9NV88 658 aaKnown RBP20.65■□□□□ 0.9
MBD3-209ENST00000592012 SHOC2Q9UQ13 582 aa20.65■□□□□ 0.9
MBD3-209ENST00000592012 C5orf60A6NFR6 353 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 GABBR2O75899 941 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 BEX3Q00994 111 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 STAT4Q14765 748 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 CYP4F22Q6NT55 531 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 SCUBE3Q8IX30 993 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 ZNF317Q96PQ6 595 aaPredicted RBP20.64■□□□□ 0.89
MBD3-209ENST00000592012 RNF39Q9H2S5 420 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 FARP1Q9Y4F1 1045 aaPredicted RBP20.64■□□□□ 0.89
MBD3-209ENST00000592012 PDCD11Q14690 1871 aaKnown RBP20.64■□□□□ 0.89
MBD3-209ENST00000592012 SETSIPP0DME0 302 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 CREB1P16220 341 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 ATP5DP30049 168 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 MMRN1Q13201 1228 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 CDO1Q16878 200 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 XKR4Q5GH76 650 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 CYP4X1Q8N118 509 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 PRCCQ92733 491 aaPredicted RBP20.64■□□□□ 0.89
MBD3-209ENST00000592012 CHMP6Q96FZ7 201 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 CFAP57Q96MR6 1250 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 LPIN3Q9BQK8 851 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 CCDC77Q9BR77 488 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 DPEP3Q9H4B8 488 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.64■□□□□ 0.89
MBD3-209ENST00000592012 KLK14Q9P0G3 267 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 DDX20Q9UHI6 824 aaKnown RBP20.64■□□□□ 0.89
MBD3-209ENST00000592012 LGALS13Q9UHV8 139 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 GGA2Q9UJY4 613 aa20.64■□□□□ 0.89
MBD3-209ENST00000592012 NDC80O14777 642 aa20.63■□□□□ 0.89
MBD3-209ENST00000592012 CDH16O75309 829 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms